RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PRKCZQ05513 592 aa14.84□□□□□ -0.03
LINC00544-201ENST00000400540 CCDC102BQ68D86 513 aa14.84□□□□□ -0.03
LINC00544-201ENST00000400540 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
LINC00544-201ENST00000400540 MEIS3Q99687 375 aa14.84□□□□□ -0.03
LINC00544-201ENST00000400540 GNL3LQ9NVN8 582 aaKnown RBP14.84□□□□□ -0.03
LINC00544-201ENST00000400540 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
LINC00544-201ENST00000400540 NOB1Q9ULX3 412 aaKnown RBP14.84□□□□□ -0.03
LINC00544-201ENST00000400540 GAKO14976 1311 aa14.84□□□□□ -0.03
LINC00544-201ENST00000400540 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.04
LINC00544-201ENST00000400540 SEMA3EO15041 775 aa14.83□□□□□ -0.04
LINC00544-201ENST00000400540 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
LINC00544-201ENST00000400540 RASGRF1Q13972 1273 aa14.83□□□□□ -0.04
LINC00544-201ENST00000400540 SCYL3Q8IZE3 742 aa14.83□□□□□ -0.04
LINC00544-201ENST00000400540 PARK7Q99497 189 aaKnown RBP14.83□□□□□ -0.04
LINC00544-201ENST00000400540 IDI2Q9BXS1 227 aa14.83□□□□□ -0.04
LINC00544-201ENST00000400540 DDX4Q9NQI0 724 aaKnown RBP14.83□□□□□ -0.04
LINC00544-201ENST00000400540 GABRQQ9UN88 632 aa14.83□□□□□ -0.04
LINC00544-201ENST00000400540 ZHX2Q9Y6X8 837 aa14.83□□□□□ -0.04
LINC00544-201ENST00000400540 PLXNB2O15031 1838 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 A0A0G2JLL6 359 aaPredicted RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 CXCL11O14625 94 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 CCL5P13501 91 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 PTPRAP18433 802 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 TIMM10P62072 90 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 PICALMQ13492 652 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 GADL1Q6ZQY3 521 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 PRRT2Q7Z6L0 340 aaPredicted RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 CCDC84Q86UT8 332 aaPredicted RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 DZIP1Q86YF9 867 aaKnown RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 ZSCAN29Q8IWY8 852 aaPredicted RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 TRMT2AQ8IZ69 625 aaKnown RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 ABCF2Q9UG63 623 aa14.82□□□□□ -0.04
LINC00544-201ENST00000400540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.82□□□□□ -0.04
LINC00544-201ENST00000400540 ENTPD3O75355 529 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 HOXD10P28358 340 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 BTDP43251 543 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 FCGRTP55899 365 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 PICK1Q9NRD5 415 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 AFG3L2Q9Y4W6 797 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
LINC00544-201ENST00000400540 FAM196BA6NMK8 535 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 GJA8P48165 433 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 UBE2Q1Q7Z7E8 422 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 ZGPATQ8N5A5 531 aaKnown RBP14.8□□□□□ -0.04
LINC00544-201ENST00000400540 ZNF384Q8TF68 577 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 BIN2Q9UBW5 565 aaPredicted RBP14.8□□□□□ -0.04
LINC00544-201ENST00000400540 MROH7-TTC4A0A0A0MT08 1334 aa14.8□□□□□ -0.04
LINC00544-201ENST00000400540 A0A1B0GUL7 405 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 MAP3K10Q02779 954 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 TFCP2Q12800 502 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 PDS5AQ29RF7 1337 aaKnown RBP14.79□□□□□ -0.04
LINC00544-201ENST00000400540 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 FASTKD5Q7L8L6 764 aaKnown RBP14.79□□□□□ -0.04
LINC00544-201ENST00000400540 DPF3Q92784 378 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 XAGE2Q96GT9 111 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 API5Q9BZZ5 524 aaKnown RBP14.79□□□□□ -0.04
LINC00544-201ENST00000400540 UNC93B1Q9H1C4 597 aa14.79□□□□□ -0.04
LINC00544-201ENST00000400540 ZBTB22O15209 634 aa14.78□□□□□ -0.04
LINC00544-201ENST00000400540 GJB1P08034 283 aa14.78□□□□□ -0.04
LINC00544-201ENST00000400540 ELNP15502 786 aa14.78□□□□□ -0.04
LINC00544-201ENST00000400540 RHBDL3P58872 404 aa14.78□□□□□ -0.04
LINC00544-201ENST00000400540 MECOMQ03112 1051 aa14.78□□□□□ -0.04
LINC00544-201ENST00000400540 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
LINC00544-201ENST00000400540 FAM163AQ96GL9 167 aaPredicted RBP14.78□□□□□ -0.04
LINC00544-201ENST00000400540 DDX60LQ5H9U9 1706 aaKnown RBP14.78□□□□□ -0.04
LINC00544-201ENST00000400540 SRGAP3O43295 1099 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 ADCY3O60266 1144 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 FLT3LGP49771 235 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 UBXN2AP68543 259 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 TREML2Q5T2D2 321 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 NKX2-3Q8TAU0 364 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 U2AF1L4Q8WU68 220 aaKnown RBP14.77□□□□□ -0.05
LINC00544-201ENST00000400540 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
LINC00544-201ENST00000400540 TNNQ9UQP3 1299 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 COL6A3P12111 3177 aa14.77□□□□□ -0.05
LINC00544-201ENST00000400540 GPR75-ASB3A0A0A6YYF3 556 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 CTNND1O60716 968 aaKnown RBP14.76□□□□□ -0.05
LINC00544-201ENST00000400540 INHAP05111 366 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 RARSP54136 660 aaKnown RBP14.76□□□□□ -0.05
LINC00544-201ENST00000400540 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 ERICH6Q7L0X2 663 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 SLF2Q8IX21 1173 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 ANKRD13CQ8N6S4 541 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 SMCR8Q8TEV9 937 aaPredicted RBP14.76□□□□□ -0.05
LINC00544-201ENST00000400540 NEUROD6Q96NK8 337 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 AGTPBP1Q9UPW5 1226 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 SLC45A1Q9Y2W3 748 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 MYH1P12882 1939 aa14.76□□□□□ -0.05
LINC00544-201ENST00000400540 COL2A1P02458 1487 aaPredicted RBP14.76□□□□□ -0.05
LINC00544-201ENST00000400540 TNPO2O14787 897 aaKnown RBP14.75□□□□□ -0.05
LINC00544-201ENST00000400540 FARP2O94887 1054 aaPredicted RBP14.75□□□□□ -0.05
LINC00544-201ENST00000400540 CT47B1P0C2W7 299 aaPredicted RBP14.75□□□□□ -0.05
LINC00544-201ENST00000400540 RRP1BQ14684 758 aaKnown RBP14.75□□□□□ -0.05
LINC00544-201ENST00000400540 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
LINC00544-201ENST00000400540 SPTY2D1Q68D10 685 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms