RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 E7EVH7 732 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 KRT19P08727 400 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 TRIM27P14373 513 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 SETDB1Q15047 1291 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 TTLL3Q9Y4R7 772 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 NPC1L1Q9UHC9 1359 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 DNAI1Q9UI46 699 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 SYT1P21579 422 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 MCM7P33993 719 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 ERCC6LQ2NKX8 1250 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 CCDC25Q86WR0 208 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 LRRC2Q9BYS8 371 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 MBIPQ9NS73 344 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 CEP128Q6ZU80 1094 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-215ENST00000399637 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 ATP5DP30049 168 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 KRT222Q8N1A0 295 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 Q3C1V9 767 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 BMP2KLQ5H9B9 411 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 VPS52Q8N1B4 723 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 CCDC42Q96M95 316 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 DIXDC1Q155Q3 683 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 RHPN1Q8TCX5 695 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 FAM114A2Q9NRY5 505 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 SAMD15Q9P1V8 674 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 KIAA0586Q9BVV6 1533 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 PCDH11XQ9BZA7 1347 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 PCDH11YQ9BZA8 1340 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 TCP10L2B9ZVM9 353 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 SKILP12757 684 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 OSBPP22059 807 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 EPB41P11171 864 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 USH1GQ495M9 461 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 PPP1R21Q6ZMI0 780 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 SESTD1Q86VW0 696 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 GLG1Q92896 1179 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 CHPF2Q9P2E5 772 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 GCC2Q8IWJ2 1684 aa12.35□□□□□ -0.43
CACNA1C-215ENST00000399637 DCAF17Q5H9S7 520 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 IFT81Q8WYA0 676 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 CSRNP2Q9H175 543 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 GNA11P29992 359 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 TNNC1P63316 161 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 UAP1Q16222 522 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 TNFAIP1Q13829 316 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 PSMD6Q15008 389 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 PAG1Q9NWQ8 432 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 STX10O60499 249 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 STK10O94804 968 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 TMX3Q96JJ7 454 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 IL15P40933 162 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 TSTA3Q13630 321 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 RAPGEF1Q13905 1077 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 INF2Q27J81 1249 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 MIPOL1Q8TD10 442 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 UBLCP1Q8WVY7 318 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 TUBB4AP04350 444 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 MCM6Q14566 821 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 STIM2Q9P246 746 aa12.34□□□□□ -0.43
CACNA1C-215ENST00000399637 KIF3CO14782 793 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 TUBB4BP68371 445 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 CALCOCO2Q13137 446 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 C20orf194Q5TEA3 1177 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 DTHD1Q6ZMT9 781 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 AFAP1L2Q8N4X5 818 aa12.33□□□□□ -0.44
CACNA1C-215ENST00000399637 GPR161Q8N6U8 529 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms