RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 CYP2E1P05181 493 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 CTU1Q7Z7A3 348 aaKnown RBP18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 SIRT2Q8IXJ6 389 aa18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 ZNF296Q8WUU4 475 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 ZKSCAN4Q969J2 545 aaPredicted RBP18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 SNRKQ9NRH2 765 aa18.21■□□□□ 0.51
SMIM11A-203ENST00000399299 INPP5BP32019 993 aa18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 MAP3K10Q02779 954 aa18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 PPIL2Q13356 520 aa18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 NOL9Q5SY16 702 aaKnown RBP18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 KIF1BPQ96EK5 621 aa18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
SMIM11A-203ENST00000399299 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 ZAP70P43403 619 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 NAA16Q6N069 864 aaPredicted RBP18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 SH3BP5LQ7L8J4 393 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 AACSQ86V21 672 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 CDK5RAP2Q96SN8 1893 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 PTPN18Q99952 460 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 R3HDMLQ9H3Y0 253 aa18.19■□□□□ 0.5
SMIM11A-203ENST00000399299 CCL15-CCL14A0A0B4J2E2 113 aa18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 FKTNO75072 461 aa18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 PPATQ06203 517 aa18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 CCL15Q16663 113 aa18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 BRI3BPQ8WY22 251 aa18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 NOL10Q9BSC4 688 aaKnown RBP18.18■□□□□ 0.5
SMIM11A-203ENST00000399299 DDTLA6NHG4 134 aaPredicted RBP18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 BAG3O95817 575 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 CETPP11597 493 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 PLCG2P16885 1265 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 PPP4CP60510 307 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 SNAPC2Q13487 334 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 PICALMQ13492 652 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 PKN2Q16513 984 aaKnown RBP18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 TMED8Q6PL24 325 aaPredicted RBP18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 CLASRPQ8N2M8 674 aaKnown RBP18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 ZCCHC17Q9NP64 241 aaKnown RBP18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 DOCK1Q14185 1865 aa18.17■□□□□ 0.5
SMIM11A-203ENST00000399299 PHF20L1A8MW92 1017 aa18.16■□□□□ 0.5
SMIM11A-203ENST00000399299 IRF6O14896 467 aa18.16■□□□□ 0.5
SMIM11A-203ENST00000399299 CRHR2Q13324 411 aa18.16■□□□□ 0.5
SMIM11A-203ENST00000399299 TEX11Q8IYF3 940 aa18.16■□□□□ 0.5
SMIM11A-203ENST00000399299 PIH1D3Q9NQM4 214 aaKnown RBP18.16■□□□□ 0.5
SMIM11A-203ENST00000399299 TBC1D12O60347 775 aa18.15■□□□□ 0.5
SMIM11A-203ENST00000399299 OSBPL5Q9H0X9 879 aaPredicted RBP18.15■□□□□ 0.5
SMIM11A-203ENST00000399299 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMIM11A-203ENST00000399299 KCNH4Q9UQ05 1017 aa18.15■□□□□ 0.5
SMIM11A-203ENST00000399299 ADGRA1Q86SQ6 560 aa18.14■□□□□ 0.49
SMIM11A-203ENST00000399299 CERS3Q8IU89 383 aa18.14■□□□□ 0.49
SMIM11A-203ENST00000399299 SCYL3Q8IZE3 742 aa18.14■□□□□ 0.49
SMIM11A-203ENST00000399299 SH3RF3Q8TEJ3 882 aaPredicted RBP18.14■□□□□ 0.49
SMIM11A-203ENST00000399299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMIM11A-203ENST00000399299 CTNND1O60716 968 aaKnown RBP18.13■□□□□ 0.49
SMIM11A-203ENST00000399299 IDH1O75874 414 aaKnown RBP18.13■□□□□ 0.49
SMIM11A-203ENST00000399299 TAF1CQ15572 869 aaPredicted RBP18.13■□□□□ 0.49
SMIM11A-203ENST00000399299 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
SMIM11A-203ENST00000399299 SIPA1L1O43166 1804 aa18.13■□□□□ 0.49
SMIM11A-203ENST00000399299 PHIPQ8WWQ0 1821 aa18.13■□□□□ 0.49
SMIM11A-203ENST00000399299 ATAD5Q96QE3 1844 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 PTPRFP10586 1907 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 CCDC85CA6NKD9 419 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 APBB1O00213 710 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 IFIT2P09913 472 aaKnown RBP18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 MAP3K12Q12852 859 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 TTF1Q15361 905 aaPredicted RBP18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 ERO1AQ96HE7 468 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 DHX36Q9H2U1 1008 aaKnown RBP18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 ZFYVE28Q9HCC9 887 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 PICK1Q9NRD5 415 aa18.12■□□□□ 0.49
SMIM11A-203ENST00000399299 BTBD19C9JJ37 291 aa18.11■□□□□ 0.49
SMIM11A-203ENST00000399299 CXCL11O14625 94 aa18.11■□□□□ 0.49
SMIM11A-203ENST00000399299 CYP7A1P22680 504 aa18.11■□□□□ 0.49
SMIM11A-203ENST00000399299 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
SMIM11A-203ENST00000399299 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
SMIM11A-203ENST00000399299 NDUFB9Q9Y6M9 179 aa18.11■□□□□ 0.49
SMIM11A-203ENST00000399299 FLT1P17948 1338 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 PTPRAP18433 802 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 SP3Q02447 781 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 FBXO46Q6PJ61 603 aaPredicted RBP18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 ANKRD23Q86SG2 305 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 MAGEB6Q8N7X4 407 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 TGFBRAP1Q8WUH2 860 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 PI4KBQ9UBF8 816 aa18.1■□□□□ 0.49
SMIM11A-203ENST00000399299 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 MOGSQ13724 837 aa18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 MYH1P12882 1939 aa18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 HTTP42858 3142 aa18.09■□□□□ 0.49
SMIM11A-203ENST00000399299 TLR2O60603 784 aa18.08■□□□□ 0.48
SMIM11A-203ENST00000399299 DYNLL1P63167 89 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms