RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 SLC5A1P13866 664 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 PDE6AP16499 860 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 ADD1P35611 737 aaKnown RBP13.11□□□□□ -0.31
RCC1-204ENST00000398958 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
RCC1-204ENST00000398958 ELF2Q15723 593 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 PHKBQ93100 1093 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
RCC1-204ENST00000398958 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
RCC1-204ENST00000398958 ADD2P35612 726 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 FBXO38Q6PIJ6 1188 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 ILDR1Q86SU0 546 aaPredicted RBP13.1□□□□□ -0.31
RCC1-204ENST00000398958 MICU3Q86XE3 530 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 GOLPH3LQ9H4A5 285 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 HMGB1P09429 215 aaKnown RBP13.1□□□□□ -0.31
RCC1-204ENST00000398958 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
RCC1-204ENST00000398958 LCORLQ8N3X6 602 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 SMARCC2Q8TAQ2 1214 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 LPIN2Q92539 896 aa13.1□□□□□ -0.31
RCC1-204ENST00000398958 BAZ2BQ9UIF8 2168 aaKnown RBP13.09□□□□□ -0.31
RCC1-204ENST00000398958 SKILP12757 684 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 CDC25BP30305 580 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 ST7Q9NRC1 585 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 NUP98P52948 1817 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 NEDD4P46934 1319 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 CYP7A1P22680 504 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 PRDX5P30044 214 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 ME1P48163 572 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
RCC1-204ENST00000398958 PROM2Q8N271 834 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
RCC1-204ENST00000398958 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 RFX7Q2KHR2 1363 aa13.09□□□□□ -0.31
RCC1-204ENST00000398958 CPLX1O14810 134 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 RPS6KA4O75676 772 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
RCC1-204ENST00000398958 RBM6P78332 1123 aaKnown RBP13.08□□□□□ -0.32
RCC1-204ENST00000398958 IRX5P78411 483 aaPredicted RBP13.08□□□□□ -0.32
RCC1-204ENST00000398958 TPTE2Q6XPS3 522 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 CCAR1Q8IX12 1150 aaKnown RBP13.08□□□□□ -0.32
RCC1-204ENST00000398958 NCOA7Q8NI08 942 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 CARMIL3Q8ND23 1372 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 ATRNO75882 1429 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 NEMFO60524 1076 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 TDO2P48775 406 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 GRIK5Q16478 980 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.322e-14■□□□□ 11.3
RCC1-204ENST00000398958 ORC3Q9UBD5 711 aaPredicted RBP13.08□□□□□ -0.32
RCC1-204ENST00000398958 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
RCC1-204ENST00000398958 A0A1B0GVL5 298 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 CCDC69A6NI79 296 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 DIXDC1Q155Q3 683 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 NYAP1Q6ZVC0 841 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 SLC4A4Q9Y6R1 1079 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 SLU7O95391 586 aaKnown RBP13.07□□□□□ -0.32
RCC1-204ENST00000398958 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 NFXL1Q6ZNB6 911 aa13.07□□□□□ -0.32
RCC1-204ENST00000398958 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
RCC1-204ENST00000398958 PPP1R1BQ9UD71 204 aaPredicted RBP13.07□□□□□ -0.32
RCC1-204ENST00000398958 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
RCC1-204ENST00000398958 ZFYP08048 801 aaPredicted RBP13.06□□□□□ -0.32
RCC1-204ENST00000398958 CDC27P30260 824 aa13.06□□□□□ -0.32
RCC1-204ENST00000398958 IQCB1Q15051 598 aa13.06□□□□□ -0.32
RCC1-204ENST00000398958 C11orf57Q6ZUT1 292 aaPredicted RBP13.06□□□□□ -0.32
RCC1-204ENST00000398958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
RCC1-204ENST00000398958 CDC5LQ99459 802 aaKnown RBP13.06□□□□□ -0.32
RCC1-204ENST00000398958 FAM53CQ9NYF3 392 aa13.06□□□□□ -0.32
RCC1-204ENST00000398958 BECN2A8MW95 431 aa13.06□□□□□ -0.32
RCC1-204ENST00000398958 TRDNQ13061 729 aa13.06□□□□□ -0.32
RCC1-204ENST00000398958 C8orf76Q96K31 380 aa13.06□□□□□ -0.32
RCC1-204ENST00000398958 C6orf229H3BNL8 230 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 CAVIN2O95810 425 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
RCC1-204ENST00000398958 TXNRD1Q16881 649 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 ZNF827Q17R98 1081 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 SARM1Q6SZW1 724 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 MRFAP1L1Q96HT8 127 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 NAPBQ9H115 298 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 BTAF1O14981 1849 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 TCRBV5S4A2TA0A5A2 114 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 CCAR2Q8N163 923 aaKnown RBP13.05□□□□□ -0.32
RCC1-204ENST00000398958 NUP133Q8WUM0 1156 aa13.05□□□□□ -0.32
RCC1-204ENST00000398958 ZNF274Q96GC6 653 aaPredicted RBP13.05□□□□□ -0.32
RCC1-204ENST00000398958 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
RCC1-204ENST00000398958 STRBPQ96SI9 672 aaKnown RBP13.05□□□□□ -0.32
RCC1-204ENST00000398958 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms