RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 SPEF2Q9C093 1822 aa15.38■□□□□ 0.05
TOP3B-202ENST00000398793 NEDD4P46934 1319 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 KLF18A0A0U1RQI7 1052 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 PHKBQ93100 1093 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 MASTLQ96GX5 879 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 AIFM3Q96NN9 605 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 CPVLQ9H3G5 476 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 HELLSQ9NRZ9 838 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 GSG1L2A8MUP6 293 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 FIBPO43427 364 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 CYB5R4Q7L1T6 521 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 TACC3Q9Y6A5 838 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
TOP3B-202ENST00000398793 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
TOP3B-202ENST00000398793 NPR1P16066 1061 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 RPS6KB1P23443 525 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 HMGN5P82970 282 aaKnown RBP15.37■□□□□ 0.05
TOP3B-202ENST00000398793 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
TOP3B-202ENST00000398793 WNK3Q9BYP7 1800 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 PRPF40AO75400 957 aaKnown RBP15.36■□□□□ 0.05
TOP3B-202ENST00000398793 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
TOP3B-202ENST00000398793 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 NSUN4Q96CB9 384 aaKnown RBP15.36■□□□□ 0.05
TOP3B-202ENST00000398793 PRIMPOLQ96LW4 560 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 BBOX1O75936 387 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 BAG4O95429 457 aaKnown RBP15.36■□□□□ 0.05
TOP3B-202ENST00000398793 TOB2Q14106 344 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-202ENST00000398793 PRAMEF18Q5VWM3 479 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 MED23Q9ULK4 1368 aa15.36■□□□□ 0.05
TOP3B-202ENST00000398793 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
TOP3B-202ENST00000398793 PSMA5P28066 241 aa15.35■□□□□ 0.05
TOP3B-202ENST00000398793 BTDP43251 543 aa15.35■□□□□ 0.05
TOP3B-202ENST00000398793 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
TOP3B-202ENST00000398793 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
TOP3B-202ENST00000398793 LRRFIP1Q32MZ4 808 aaKnown RBP15.35■□□□□ 0.05
TOP3B-202ENST00000398793 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
TOP3B-202ENST00000398793 SECISBP2LQ93073 1101 aaKnown RBP15.35■□□□□ 0.05
TOP3B-202ENST00000398793 STX8Q9UNK0 236 aa15.35■□□□□ 0.05
TOP3B-202ENST00000398793 FZD1Q9UP38 647 aa15.35■□□□□ 0.05
TOP3B-202ENST00000398793 TCRBV5S4A2TA0A5A2 114 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 RASSF7Q02833 373 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 PRKG1Q13976 671 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 CERS5Q8N5B7 392 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 CPLX1O14810 134 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 MFSD6Q6ZSS7 791 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 FAM184AQ8NB25 1140 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 NOL10Q9BSC4 688 aaKnown RBP15.34■□□□□ 0.05
TOP3B-202ENST00000398793 ZSWIM5Q9P217 1185 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
TOP3B-202ENST00000398793 MPHOSPH10O00566 681 aaKnown RBP15.34■□□□□ 0.05
TOP3B-202ENST00000398793 ALDH1B1P30837 517 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 DLK2Q6UY11 383 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 ILDR2Q71H61 639 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 ZSWIM6Q9HCJ5 1215 aa15.34■□□□□ 0.05
TOP3B-202ENST00000398793 RBM27Q9P2N5 1060 aaKnown RBP15.34■□□□□ 0.05
TOP3B-202ENST00000398793 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
TOP3B-202ENST00000398793 ZFYP08048 801 aaPredicted RBP15.33■□□□□ 0.05
TOP3B-202ENST00000398793 CRY2Q49AN0 593 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.05
TOP3B-202ENST00000398793 TEX2Q8IWB9 1127 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 TEX11Q8IYF3 940 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 FLAD1Q8NFF5 587 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 SNX21Q969T3 373 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 UIMC1Q96RL1 719 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 NACAP1Q9BZK3 213 aa15.33■□□□□ 0.05
TOP3B-202ENST00000398793 SBF2Q86WG5 1849 aa15.33■□□□□ 0.04
TOP3B-202ENST00000398793 POLD1P28340 1107 aa15.33■□□□□ 0.04
TOP3B-202ENST00000398793 PLCD1P51178 756 aa15.33■□□□□ 0.04
TOP3B-202ENST00000398793 TTLL6Q8N841 843 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 MKNK2Q9HBH9 465 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 ECE2O60344 883 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 ST3GAL1Q11201 340 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 NFIAQ12857 509 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 DHX32Q7L7V1 743 aaKnown RBP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 PATL2C9JE40 543 aaKnown RBP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 H3BQV1 296 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 ECM2O94769 699 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 ATP2B4P23634 1241 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 SCRN1Q12765 414 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 TTC14Q96N46 770 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 TDRD3Q9H7E2 651 aaKnown RBP15.32■□□□□ 0.04
TOP3B-202ENST00000398793 LEMD3Q9Y2U8 911 aa15.32■□□□□ 0.04
TOP3B-202ENST00000398793 UBE3CQ15386 1083 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms