RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
TFF3-202ENST00000398431 FMNL1O95466 1100 aaPredicted RBP14.96□□□□□ -0.01
TFF3-202ENST00000398431 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
TFF3-202ENST00000398431 HOXD10P28358 340 aa14.96□□□□□ -0.01
TFF3-202ENST00000398431 GRK4P32298 578 aa14.96□□□□□ -0.01
TFF3-202ENST00000398431 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
TFF3-202ENST00000398431 ZNF384Q8TF68 577 aa14.96□□□□□ -0.01
TFF3-202ENST00000398431 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
TFF3-202ENST00000398431 A0A0G2JLL6 359 aaPredicted RBP14.95□□□□□ -0.02
TFF3-202ENST00000398431 H0YGN5 161 aa14.95□□□□□ -0.02
TFF3-202ENST00000398431 PRRT2Q7Z6L0 340 aaPredicted RBP14.95□□□□□ -0.02
TFF3-202ENST00000398431 UBE2Q1Q7Z7E8 422 aa14.95□□□□□ -0.02
TFF3-202ENST00000398431 ZGPATQ8N5A5 531 aaKnown RBP14.95□□□□□ -0.02
TFF3-202ENST00000398431 XAGE2Q96GT9 111 aa14.95□□□□□ -0.02
TFF3-202ENST00000398431 GABRQQ9UN88 632 aa14.95□□□□□ -0.02
TFF3-202ENST00000398431 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
TFF3-202ENST00000398431 MYPNQ86TC9 1320 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 GPR75-ASB3A0A0A6YYF3 556 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 RARSP54136 660 aaKnown RBP14.94□□□□□ -0.02
TFF3-202ENST00000398431 RHBDL3P58872 404 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 PRKCZQ05513 592 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 TFCP2Q12800 502 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 RAET1EQ8TD07 263 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 PARK7Q99497 189 aaKnown RBP14.94□□□□□ -0.02
TFF3-202ENST00000398431 ABCF2Q9UG63 623 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 HDAC5Q9UQL6 1122 aa14.94□□□□□ -0.02
TFF3-202ENST00000398431 MGAMO43451 1857 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 CTNND1O60716 968 aaKnown RBP14.93□□□□□ -0.02
TFF3-202ENST00000398431 GJB1P08034 283 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 CCL5P13501 91 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 BTDP43251 543 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 GJA8P48165 433 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 MECOMQ03112 1051 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 MTX1Q13505 466 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 FASTKD5Q7L8L6 764 aaKnown RBP14.93□□□□□ -0.02
TFF3-202ENST00000398431 ARHGAP45Q92619 1136 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
TFF3-202ENST00000398431 PHIPQ8WWQ0 1821 aa14.93□□□□□ -0.02
TFF3-202ENST00000398431 CEP290O15078 2479 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 DOCK2Q92608 1830 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 FCGRTP55899 365 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 SPTY2D1Q68D10 685 aaPredicted RBP14.92□□□□□ -0.02
TFF3-202ENST00000398431 CCDC84Q86UT8 332 aaPredicted RBP14.92□□□□□ -0.02
TFF3-202ENST00000398431 DZIP1Q86YF9 867 aaKnown RBP14.92□□□□□ -0.02
TFF3-202ENST00000398431 ZSCAN29Q8IWY8 852 aaPredicted RBP14.92□□□□□ -0.02
TFF3-202ENST00000398431 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 HMG20BQ9P0W2 317 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 SLC45A1Q9Y2W3 748 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 DOCK3Q8IZD9 2030 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 PTPRFP10586 1907 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 MROH7-TTC4A0A0A0MT08 1334 aa14.92□□□□□ -0.02
TFF3-202ENST00000398431 SRGAP3O43295 1099 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 TBC1D12O60347 775 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 NPM3O75607 178 aaKnown RBP14.91□□□□□ -0.02
TFF3-202ENST00000398431 PICALMQ13492 652 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 PI16Q6UXB8 463 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 GADL1Q6ZQY3 521 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 ERICH6Q7L0X2 663 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 SLF2Q8IX21 1173 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 NKX2-3Q8TAU0 364 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 RNF208Q9H0X6 261 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 TNNQ9UQP3 1299 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 AKAP2Q9Y2D5 859 aa14.91□□□□□ -0.02
TFF3-202ENST00000398431 GNAI3P08754 354 aa14.9□□□□□ -0.02
TFF3-202ENST00000398431 FLT3LGP49771 235 aa14.9□□□□□ -0.02
TFF3-202ENST00000398431 RRP1BQ14684 758 aaKnown RBP14.9□□□□□ -0.02
TFF3-202ENST00000398431 MVPQ14764 893 aaKnown RBP14.9□□□□□ -0.02
TFF3-202ENST00000398431 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
TFF3-202ENST00000398431 NEUROD6Q96NK8 337 aa14.9□□□□□ -0.02
TFF3-202ENST00000398431 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
TFF3-202ENST00000398431 TRIM75PA6NK02 468 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 FAM196BA6NMK8 535 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 ADCY3O60266 1144 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 DPF3Q92784 378 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 BIN2Q9UBW5 565 aaPredicted RBP14.89□□□□□ -0.03
TFF3-202ENST00000398431 TRIOBPQ9H2D6 2365 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
TFF3-202ENST00000398431 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 SGPL1O95470 568 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 ELNP15502 786 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 ARID4AP29374 1257 aaPredicted RBP14.88□□□□□ -0.03
TFF3-202ENST00000398431 UBXN2AP68543 259 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 IRF5Q13568 498 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 TREML2Q5T2D2 321 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 SPATA5Q8NB90 893 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 PXYLP1Q8TE99 480 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 U2AF1L4Q8WU68 220 aaKnown RBP14.88□□□□□ -0.03
TFF3-202ENST00000398431 PRO3102Q9H379 93 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.88□□□□□ -0.03
TFF3-202ENST00000398431 AGTPBP1Q9UPW5 1226 aa14.88□□□□□ -0.03
TFF3-202ENST00000398431 MAP4K4O95819 1239 aaPredicted RBP14.87□□□□□ -0.03
TFF3-202ENST00000398431 LDHCP07864 332 aa14.87□□□□□ -0.03
TFF3-202ENST00000398431 MCAMP43121 646 aa14.87□□□□□ -0.03
TFF3-202ENST00000398431 SPP2Q13103 211 aa14.87□□□□□ -0.03
TFF3-202ENST00000398431 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
TFF3-202ENST00000398431 ANKRD13CQ8N6S4 541 aa14.87□□□□□ -0.03
TFF3-202ENST00000398431 OSBPL5Q9H0X9 879 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms