RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 PARD3BQ8TEW8 1205 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 FOSL2P15408 326 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 TRAPPC10P48553 1259 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 NCBP1Q09161 790 aaKnown RBP14.27□□□□□ -0.13
CCBE1-201ENST00000398179 EP400NLQ6ZTU2 488 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 RGL1Q9NZL6 768 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 AP3B1O00203 1094 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.13
CCBE1-201ENST00000398179 AMPHP49418 695 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 CEP70Q8NHQ1 597 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 SPATA32Q96LK8 384 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 HOMER3Q9NSC5 361 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 CTTNBP2NLQ9P2B4 639 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 FSD2A1L4K1 749 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 WBP4O75554 376 aaKnown RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 HAUS8Q9BT25 410 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 EHMT1Q9H9B1 1298 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 CKAP4Q07065 602 aaKnown RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 MLECQ14165 292 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 SKAP1Q86WV1 359 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 MFN1Q8IWA4 741 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 WDR60Q8WVS4 1066 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 GPBP1L1Q9HC44 474 aaPredicted RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 ERICH2A1L162 156 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 PARP1P09874 1014 aaKnown RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 OCA2Q04671 838 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 KCNV2Q8TDN2 545 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 RRP36Q96EU6 259 aaKnown RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 TRMT1Q9NXH9 659 aaKnown RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 DBNLQ9UJU6 430 aaKnown RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 K7ELQ4 463 aaPredicted RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 C15orf59Q2T9L4 293 aaPredicted RBP14.26□□□□□ -0.13
CCBE1-201ENST00000398179 GGT6Q6P531 493 aa14.26□□□□□ -0.13
CCBE1-201ENST00000398179 TBKBP1A7MCY6 615 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 G3V3G9 751 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 QKIQ96PU8 341 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCBE1-201ENST00000398179 KRR1Q13601 381 aaKnown RBP14.25□□□□□ -0.13
CCBE1-201ENST00000398179 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
CCBE1-201ENST00000398179 RANBP6O60518 1105 aaKnown RBP14.25□□□□□ -0.13
CCBE1-201ENST00000398179 PPP4R3AQ6IN85 833 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 CCDC28BQ9BUN5 200 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 LRRC27Q9C0I9 530 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 RIPK4P57078 832 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 DUSP27Q5VZP5 1158 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 MTRQ99707 1265 aa14.25□□□□□ -0.13
CCBE1-201ENST00000398179 SYCE3A1L190 88 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 RANBP17Q9H2T7 1088 aaKnown RBP14.24□□□□□ -0.13
CCBE1-201ENST00000398179 USP47Q96K76 1375 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 NBPF26B4DH59 902 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 RECQLP46063 649 aaPredicted RBP14.24□□□□□ -0.13
CCBE1-201ENST00000398179 ICA1Q05084 483 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 PRLP01236 227 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 NEK11Q8NG66 645 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 ZBED2Q9BTP6 218 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 TPPPO94811 219 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCBE1-201ENST00000398179 ARHGAP29Q52LW3 1261 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 HOOK2Q96ED9 719 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 PRDM4Q9UKN5 801 aa14.24□□□□□ -0.13
CCBE1-201ENST00000398179 TRPA1O75762 1119 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 PSMA5P28066 241 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 NDE1Q9NXR1 346 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 WDR37Q9Y2I8 494 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 COPG1Q9Y678 874 aaKnown RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 FLOT1O75955 427 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 TRIM37O94972 964 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 CLUP10909 449 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 GRK2P25098 689 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 BNIP1Q12981 228 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 TRMT10CQ7L0Y3 403 aaKnown RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 FAM81AQ8TBF8 368 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 PRDM5Q9NQX1 630 aaPredicted RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 NOP53Q9NZM5 478 aaKnown RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 TAF11Q15544 211 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 CCSAPQ6IQ19 270 aaPredicted RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 PPP4R3CPQ6ZMV5 832 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 HARSP12081 509 aaKnown RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 FBXO18Q8NFZ0 1043 aa14.23□□□□□ -0.13
CCBE1-201ENST00000398179 MAP3K20Q9NYL2 800 aaKnown RBP14.23□□□□□ -0.13
CCBE1-201ENST00000398179 ELMSAN1Q6PJG2 1045 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 PNMA8AQ86V59 439 aaPredicted RBP14.22□□□□□ -0.13
CCBE1-201ENST00000398179 PPP1R14CQ8TAE6 165 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 MMADHCQ9H3L0 296 aaPredicted RBP14.22□□□□□ -0.13
CCBE1-201ENST00000398179 DSEQ9UL01 958 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 CCPG1Q9ULG6 757 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 STK38LQ9Y2H1 464 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 PRC1O43663 620 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 TBL3Q12788 808 aaKnown RBP14.22□□□□□ -0.13
CCBE1-201ENST00000398179 TMEM191CA6NGB0 347 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 TMEM191BP0C7N4 346 aa14.22□□□□□ -0.13
CCBE1-201ENST00000398179 TERF2Q15554 542 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms