RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZAP70P43403 619 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 FKBP4Q02790 459 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 SPZ1Q9BXG8 430 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 IL25Q9H293 177 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 SWAP70Q9UH65 585 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 ZNF532Q9HCE3 1301 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 H3BQV1 296 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 PHKA1P46020 1223 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 IFFO2Q5TF58 517 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 SEPT12Q8IYM1 358 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 CTCFLQ8NI51 663 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 DNAJC2Q99543 621 aaKnown RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 IKBKBO14920 756 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 TUBB4BP68371 445 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 TROAPQ12815 778 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 VPS37DQ86XT2 251 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 DHX37Q8IY37 1157 aaKnown RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 CEP57L1Q8IYX8 460 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 LEO1Q8WVC0 666 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 FAM84BQ96KN1 310 aaPredicted RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 PTPDC1A2A3K4 754 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 GSG1L2A8MUP6 293 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 MTERF4Q7Z6M4 381 aaKnown RBP6.8□□□□□ -1.32
PTPRD-206ENST00000397617 DAGLBQ8NCG7 672 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 SPATA32Q96LK8 384 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 NUP62CLQ9H1M0 184 aa6.8□□□□□ -1.32
PTPRD-206ENST00000397617 NTRK3Q16288 839 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 STYK1Q6J9G0 422 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 AFF2P51816 1311 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 CAVIN1Q6NZI2 390 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 KRT27Q7Z3Y8 459 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 NEDD1Q8NHV4 660 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 MRPS27Q92552 414 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 SYTL4Q96C24 671 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 NSUN4Q96CB9 384 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 ATP6V0A2Q9Y487 856 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 SPAG1Q07617 926 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 IGDCC4Q8TDY8 1250 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 ANO10Q9NW15 660 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 ORC3Q9UBD5 711 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 FOXP2O15409 715 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 ZNF500O60304 480 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 CUTAO60888 179 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 IDH1O75874 414 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 GPATCH4Q5T3I0 446 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 CATIPQ7Z7H3 387 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 FUCA2Q9BTY2 467 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 ESPNB1AK53 854 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 Q6ZUG5 572 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 CLSTN2Q9H4D0 955 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 DACH1Q9UI36 760 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 GNPATO15228 680 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 ERCC5P28715 1186 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 WTAPQ15007 396 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 SEC23AQ15436 765 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 KLHDC4Q8TBB5 520 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 BICD2Q8TD16 824 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 FDX1P10109 184 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 RBM17Q96I25 401 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 AK8Q96MA6 479 aa6.79□□□□□ -1.32
PTPRD-206ENST00000397617 NOL7Q9UMY1 257 aaKnown RBP6.79□□□□□ -1.32
PTPRD-206ENST00000397617 METAP2P50579 478 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRD-206ENST00000397617 RTFDC1Q9BY42 306 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-206ENST00000397617 PUS3Q9BZE2 481 aaKnown RBP6.78□□□□□ -1.32
PTPRD-206ENST00000397617 TSPY26PQ9H489 355 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 CCDC39Q9UFE4 941 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 GOLGA8BA8MQT2 603 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 SLC12A7Q9Y666 1083 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 MOXD1Q6UVY6 613 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 STOX1Q6ZVD7 989 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 ENGASEQ8NFI3 743 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 GPTP24298 496 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 GSDMDP57764 484 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 NBR1Q14596 966 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 FANCBQ8NB91 859 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 ABCB11O95342 1321 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 TDO2P48775 406 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 AKAP17AQ02040 695 aaKnown RBP6.78□□□□□ -1.32
PTPRD-206ENST00000397617 FAM98CQ17RN3 349 aaKnown RBP6.78□□□□□ -1.32
PTPRD-206ENST00000397617 LINC00301Q8NCQ3 95 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 KCND1Q9NSA2 647 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 SLC4A3P48751 1232 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 ZSCAN23Q3MJ62 389 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 TSHZ3Q63HK5 1081 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 CCDC83Q8IWF9 413 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 PSME4Q14997 1843 aa6.78□□□□□ -1.32
PTPRD-206ENST00000397617 ADD1P35611 737 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 IDI2Q9BXS1 227 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 KLF18A0A0U1RQI7 1052 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 PRPF40AO75400 957 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 GCFC2P16383 781 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 GNA11P29992 359 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 NFIXQ14938 502 aa6.77□□□□□ -1.33
PTPRD-206ENST00000397617 ZRSR1Q15695 479 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 METTL16Q86W50 562 aaKnown RBP6.77□□□□□ -1.33
PTPRD-206ENST00000397617 ARHGEF1Q92888 912 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms