RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 SPATA20Q8TB22 786 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 CARD10Q9BWT7 1032 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 TNS3Q68CZ2 1445 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 SPATA31A3Q5VYP0 1347 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 FECHP22830 423 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 PTPREP23469 700 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 DDX46Q7L014 1031 aaKnown RBP6.21□□□□□ -1.42
PTPRD-205ENST00000397611 HNRNPLLQ8WVV9 542 aaKnown RBP6.21□□□□□ -1.42
PTPRD-205ENST00000397611 LRRC59Q96AG4 307 aaKnown RBP6.21□□□□□ -1.42
PTPRD-205ENST00000397611 PNPLA7Q6ZV29 1317 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 LRRC10BA6NIK2 292 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 CTDNEP1O95476 244 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 JARID2Q92833 1246 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 NACAP1Q9BZK3 213 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 TLR7Q9NYK1 1049 aaKnown RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 ERVV-1B6SEH8 477 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 PRC1O43663 620 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 OAS2P29728 719 aaKnown RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 NFATC2IPQ8NCF5 419 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 RPGRIP1Q96KN7 1286 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 ERICH2A1L162 156 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 APOA5Q6Q788 366 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 GSDMAQ96QA5 445 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 MYL1P05976 194 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 PPP1R2P41236 205 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 IARSP41252 1262 aaKnown RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 CABP4P57796 275 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 ENOX2Q16206 610 aaKnown RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 VSTM4Q8IW00 320 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 KRT23Q9C075 422 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 FOXP1Q9H334 677 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 PUF60Q9UHX1 559 aaKnown RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 GOLIM4O00461 696 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 ZNF202O95125 648 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 MCM3P25205 808 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 SYKP43405 635 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 DNA2P51530 1060 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 ARHGAP27Q6ZUM4 889 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 VPS37DQ86XT2 251 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 KRI1Q8N9T8 703 aaKnown RBP6.2□□□□□ -1.42
PTPRD-205ENST00000397611 GOLGA1Q92805 767 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 CTAGE1Q96RT6 745 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 AXIN2Q9Y2T1 843 aa6.2□□□□□ -1.42
PTPRD-205ENST00000397611 KLF18A0A0U1RQI7 1052 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 NBPF26B4DH59 902 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 ZNF213O14771 459 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 IFIT5Q13325 482 aaKnown RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 TERF2Q15554 542 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC144BQ3MJ40 725 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC93Q567U6 631 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 NBPF14Q5TI25 921 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 NBPF10Q6P3W6 841 aaKnown RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC144CPQ8IYA2 1237 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 NBPF15Q8N660 670 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 FERMT2Q96AC1 680 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 TCEANC2Q96MN5 208 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 ORAI2Q96SN7 254 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CTAGE15A4D2H0 777 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CTAGE8P0CG41 777 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 LRMPQ12912 555 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 HSP90AA4PQ58FG1 418 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CTAGE6Q86UF2 777 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 CTAGE4Q8IX94 777 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 MYO6Q9UM54 1294 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 XBP1P17861 261 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 FOXO4P98177 505 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 PTPAQ15257 358 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 BANK1Q8NDB2 785 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 MYCBPQ99417 103 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 RNF26Q9BY78 433 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 INCENPQ9NQS7 918 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 PDS5AQ29RF7 1337 aaKnown RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 GOLGA8BA8MQT2 603 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 RHOXF2BP0C7M4 288 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 BRD3Q15059 726 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 E4F1Q66K89 784 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 KRT40Q6A162 431 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 KLHL10Q6JEL2 608 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 RHOXF2Q9BQY4 288 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 BCCIPQ9P287 314 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 FGAP02671 866 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 MATR3P43243 847 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 ZNF18P17022 549 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 ATF3P18847 181 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 TRIM14Q14142 442 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 FOXR2Q6PJQ5 311 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 C11orf57Q6ZUT1 292 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 SCLT1Q96NL6 688 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 GPR161Q8N6U8 529 aaKnown RBP6.19□□□□□ -1.42
PTPRD-205ENST00000397611 RABEP2Q9H5N1 569 aa6.19□□□□□ -1.42
PTPRD-205ENST00000397611 ZBTB43O43298 467 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 TADA3O75528 432 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 ERLIN2O94905 339 aa6.18□□□□□ -1.42
PTPRD-205ENST00000397611 KARSQ15046 597 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms