RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ZNF804BA4D1E1 1349 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 CHMP2AO43633 222 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 RAD17O75943 681 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 HSPA1LP34931 641 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 MAEAQ7L5Y9 396 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 CDC42BPGQ6DT37 1551 aa12.77□□□□□ -0.37
IFT140-202ENST00000397417 H7C1W4 665 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 CDC25AP30304 524 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 USP8P40818 1118 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 MTIF2P46199 727 aaKnown RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 TMTC2Q8N394 836 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 CCDC112Q8NEF3 446 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 TNKSO95271 1327 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 STAT6P42226 847 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 ARID5AQ03989 594 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 POLA2Q14181 598 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 CLIC6Q96NY7 704 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 URI1O94763 535 aaPredicted RBP12.76□□□□□ -0.37
IFT140-202ENST00000397417 GNAT2P19087 354 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 STX1AQ16623 288 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 CUL5Q93034 780 aa12.76□□□□□ -0.37
IFT140-202ENST00000397417 SMTNL1A8MU46 457 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
IFT140-202ENST00000397417 ASIC1P78348 528 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 TTC6Q86TZ1 520 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
IFT140-202ENST00000397417 N4BP3O15049 544 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 TXKP42681 527 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 KCNG4Q8TDN1 519 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
IFT140-202ENST00000397417 TRIM47Q96LD4 638 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 DACH1Q9UI36 760 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 TDRD12Q587J7 1177 aaKnown RBP12.75□□□□□ -0.37
IFT140-202ENST00000397417 TRMT44Q8IYL2 757 aaKnown RBP12.75□□□□□ -0.37
IFT140-202ENST00000397417 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
IFT140-202ENST00000397417 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
IFT140-202ENST00000397417 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
IFT140-202ENST00000397417 RRP9O43818 475 aaKnown RBP12.74□□□□□ -0.37
IFT140-202ENST00000397417 CYP2D6P10635 497 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 POLD1P28340 1107 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 UBASH3AP57075 661 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 ZSWIM6Q9HCJ5 1215 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 DDX39AO00148 427 aaKnown RBP12.74□□□□□ -0.37
IFT140-202ENST00000397417 ZBTB7AO95365 584 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 BRD1O95696 1058 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 DDIT3P35638 169 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 SLC44A5Q8NCS7 719 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 NR1I2O75469 434 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 CYP2E1P05181 493 aaPredicted RBP12.74□□□□□ -0.37
IFT140-202ENST00000397417 BTDP43251 543 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 WDR66Q8TBY9 1149 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 DRC1Q96MC2 740 aa12.74□□□□□ -0.37
IFT140-202ENST00000397417 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 FAM200AQ8TCP9 573 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 CALML4Q96GE6 196 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 HDAC9Q9UKV0 1011 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 CRB1P82279 1406 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
IFT140-202ENST00000397417 ZNF445P59923 1031 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.377e-7■■■■■ 173.6
IFT140-202ENST00000397417 TBC1D7Q9P0N9 293 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 IFNKQ9P0W0 207 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
IFT140-202ENST00000397417 KRT2P35908 639 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
IFT140-202ENST00000397417 ZMYM1Q5SVZ6 1142 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 ANO1Q5XXA6 986 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 BLZF1Q9H2G9 400 aa12.73□□□□□ -0.37
IFT140-202ENST00000397417 SLC1A4P43007 532 aa12.72□□□□□ -0.37
IFT140-202ENST00000397417 ITPK1Q13572 414 aa12.72□□□□□ -0.37
IFT140-202ENST00000397417 KIAA1328Q86T90 577 aa12.72□□□□□ -0.37
IFT140-202ENST00000397417 EYA3Q99504 573 aa12.72□□□□□ -0.37
IFT140-202ENST00000397417 FAM193AP78312 1265 aa12.72□□□□□ -0.37
IFT140-202ENST00000397417 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
IFT140-202ENST00000397417 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms