RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
ATN1-202ENST00000396684 CDK11BP21127 795 aaKnown RBP13.75□□□□□ -0.21
ATN1-202ENST00000396684 CKAP2LQ8IYA6 745 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 MASTLQ96GX5 879 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
ATN1-202ENST00000396684 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 CTAGE5O15320 804 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 PPIP5K2O43314 1243 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 TPM3P06753 285 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 BTDP43251 543 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 TSGA10IPQ3SY00 556 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 TRIM5Q9C035 493 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 SLIT2O94813 1529 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
ATN1-202ENST00000396684 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 PHKBQ93100 1093 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 TEKT1Q969V4 418 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 BRIP1Q9BX63 1249 aa13.75□□□□□ -0.21
ATN1-202ENST00000396684 PRDX5P30044 214 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 TFAP4Q01664 338 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 ATL3Q6DD88 541 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 ZNF654Q8IZM8 581 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 TNKSO95271 1327 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 DEXIO95424 95 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 CEP57L1Q8IYX8 460 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
ATN1-202ENST00000396684 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
ATN1-202ENST00000396684 PES1O00541 588 aaKnown RBP13.73□□□□□ -0.21
ATN1-202ENST00000396684 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 OTUD7BQ6GQQ9 843 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 CDK5RAP3Q96JB5 506 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 ADD1P35611 737 aaKnown RBP13.73□□□□□ -0.21
ATN1-202ENST00000396684 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 GYS1P13807 737 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
ATN1-202ENST00000396684 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 ANKRD20A12PQ8NF67 263 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 ZMYM6O95789 1325 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 SPTLC2O15270 562 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 EN1Q05925 392 aaPredicted RBP13.73□□□□□ -0.21
ATN1-202ENST00000396684 DIXDC1Q155Q3 683 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
ATN1-202ENST00000396684 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
ATN1-202ENST00000396684 GIMAP6Q6P9H5 292 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 TMED8Q6PL24 325 aaPredicted RBP13.72□□□□□ -0.21
ATN1-202ENST00000396684 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 APOA5Q6Q788 366 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
ATN1-202ENST00000396684 COA1Q9GZY4 146 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 CALML3P27482 149 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 SCNN1DP51172 638 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 GPSM2P81274 684 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
ATN1-202ENST00000396684 FGFR2P21802 821 aa13.71□□□□□ -0.21
ATN1-202ENST00000396684 CCDC39Q9UFE4 941 aa13.71□□□□□ -0.21
ATN1-202ENST00000396684 ALX1Q15699 326 aa13.71□□□□□ -0.21
ATN1-202ENST00000396684 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
ATN1-202ENST00000396684 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
ATN1-202ENST00000396684 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
ATN1-202ENST00000396684 ZSWIM5Q9P217 1185 aa13.71□□□□□ -0.21
ATN1-202ENST00000396684 V9GY48 417 aaPredicted RBP13.71□□□□□ -0.21
ATN1-202ENST00000396684 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.22
ATN1-202ENST00000396684 ANO10Q9NW15 660 aa13.71□□□□□ -0.22
ATN1-202ENST00000396684 KRT40Q6A162 431 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 TBC1D10CQ8IV04 446 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 FANCBQ8NB91 859 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 DBNDD1Q9H9R9 158 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 BMP15O95972 392 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 KRT2P35908 639 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
ATN1-202ENST00000396684 STOX1Q6ZVD7 989 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 CNNM3Q8NE01 707 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
ATN1-202ENST00000396684 DACH1Q9UI36 760 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 MARF1Q9Y4F3 1742 aaKnown RBP13.7□□□□□ -0.22
ATN1-202ENST00000396684 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 PARP1P09874 1014 aaKnown RBP13.7□□□□□ -0.22
ATN1-202ENST00000396684 C3orf67Q6ZVT6 689 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 SP8Q8IXZ3 490 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 LEO1Q8WVC0 666 aaPredicted RBP13.7□□□□□ -0.22
ATN1-202ENST00000396684 FEZ1Q99689 392 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
ATN1-202ENST00000396684 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 GSG1L2A8MUP6 293 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 TPM2P07951 284 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 TCP10Q12799 353 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 NIM1KQ8IY84 436 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
ATN1-202ENST00000396684 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
ATN1-202ENST00000396684 BCL9LQ86UU0 1499 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 COL18A1P39060 1754 aa13.69□□□□□ -0.22
ATN1-202ENST00000396684 NAPAP54920 295 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms