RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 DCDC2CA8MYV0 355 aa7□□□□□ -1.29
CMC1-202ENST00000396610 SCAMP3O14828 347 aaKnown RBP7□□□□□ -1.29
CMC1-202ENST00000396610 PF4P02776 101 aa7□□□□□ -1.29
CMC1-202ENST00000396610 SLFN14P0C7P3 912 aa7□□□□□ -1.29
CMC1-202ENST00000396610 CDK8P49336 464 aa7□□□□□ -1.29
CMC1-202ENST00000396610 FAM160A1Q05DH4 1040 aa7□□□□□ -1.29
CMC1-202ENST00000396610 ZC3H12AQ5D1E8 599 aaKnown RBP7□□□□□ -1.29
CMC1-202ENST00000396610 WIPI1Q5MNZ9 446 aaPredicted RBP7□□□□□ -1.29
CMC1-202ENST00000396610 SCARA3Q6AZY7 606 aa7□□□□□ -1.29
CMC1-202ENST00000396610 LRFN4Q6PJG9 635 aa7□□□□□ -1.29
CMC1-202ENST00000396610 PRR23CQ6ZRP0 262 aa7□□□□□ -1.29
CMC1-202ENST00000396610 RELL1Q8IUW5 271 aa7□□□□□ -1.29
CMC1-202ENST00000396610 FANCD2OSQ96PS1 177 aa7□□□□□ -1.29
CMC1-202ENST00000396610 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
CMC1-202ENST00000396610 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
CMC1-202ENST00000396610 METTL5Q9NRN9 209 aaKnown RBP7□□□□□ -1.29
CMC1-202ENST00000396610 CSADQ9Y600 493 aa7□□□□□ -1.29
CMC1-202ENST00000396610 SCO2A0A1W2PP80 73 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 MINDY4BA8MYZ0 360 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 DYRK3O43781 588 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 MAP4P27816 1152 aaKnown RBP6.99□□□□□ -1.29
CMC1-202ENST00000396610 RXRBP28702 533 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 ASPAP45381 313 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 USP11P51784 963 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 LMNB2Q03252 620 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 CAMK2GQ13555 558 aaPredicted RBP6.99□□□□□ -1.29
CMC1-202ENST00000396610 PWP1Q13610 501 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 INPP5AQ14642 412 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 BNC2Q6ZN30 1099 aaPredicted RBP6.99□□□□□ -1.29
CMC1-202ENST00000396610 TRIM42Q8IWZ5 723 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 FBLIM1Q8WUP2 373 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 PLPPR2Q96GM1 343 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 ATXN3LQ9H3M9 355 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 ACSS3Q9H6R3 686 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 DISC1Q9NRI5 854 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 PCDHGB7Q9Y5F8 929 aa6.99□□□□□ -1.29
CMC1-202ENST00000396610 NEFMP07197 916 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 H2AFB1P0C5Y9 115 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 H2AFB2P0C5Z0 115 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 HCLS1P14317 486 aaPredicted RBP6.98□□□□□ -1.29
CMC1-202ENST00000396610 ERVK-24P63145 666 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 HDLBPQ00341 1268 aaKnown RBP6.98□□□□□ -1.29
CMC1-202ENST00000396610 TTLL4Q14679 1199 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 ZNF394Q53GI3 561 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 PPM1JQ5JR12 505 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 SNAP47Q5SQN1 464 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 BEND4Q6ZU67 534 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 JARID2Q92833 1246 aaPredicted RBP6.98□□□□□ -1.29
CMC1-202ENST00000396610 RNF34Q969K3 372 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 ELMO3Q96BJ8 720 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 C7orf69Q9H7B7 122 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 PIDD1Q9HB75 910 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 RAXQ9Y2V3 346 aa6.98□□□□□ -1.29
CMC1-202ENST00000396610 HMX2A2RU54 273 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 PRAMEF27A3QJZ7 478 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 F13A1P00488 732 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 GARTP22102 1010 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 NTF4P34130 210 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 METTL16Q86W50 562 aaKnown RBP6.97□□□□□ -1.29
CMC1-202ENST00000396610 C12orf40Q86WS4 652 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 SEMA6CQ9H3T2 930 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
CMC1-202ENST00000396610 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.96□□□□□ -1.3
CMC1-202ENST00000396610 NFICP08651 508 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 C9orf131Q5VYM1 1079 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 USP48Q86UV5 1035 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 GOLM1Q8NBJ4 401 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 EZH1Q92800 747 aaPredicted RBP6.96□□□□□ -1.3
CMC1-202ENST00000396610 YIPF2Q9BWQ6 316 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 PICK1Q9NRD5 415 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 STOML1Q9UBI4 398 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 ADAMTS1Q9UHI8 967 aa6.96□□□□□ -1.3
CMC1-202ENST00000396610 FAM95CA0A1B0GW59 222 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
CMC1-202ENST00000396610 EIF4A3P38919 411 aaKnown RBP6.95□□□□□ -1.3
CMC1-202ENST00000396610 ZBTB37Q5TC79 503 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 FBXL19Q6PCT2 694 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 HDXQ7Z353 690 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 UBE3DQ7Z6J8 389 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 CLEC10AQ8IUN9 316 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 RNF214Q8ND24 703 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 FBXO27Q8NI29 283 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 ISL2Q96A47 359 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 FAM83CQ9BQN1 747 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 LGR6Q9HBX8 967 aa6.95□□□□□ -1.3
CMC1-202ENST00000396610 FAM221AA4D161 298 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 RNGTTO60942 597 aaKnown RBP6.94□□□□□ -1.3
CMC1-202ENST00000396610 CILPO75339 1184 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 BPNT1O95861 308 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 TCF3P15923 654 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 FSTP19883 344 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 RPL6Q02878 288 aaKnown RBP6.94□□□□□ -1.3
CMC1-202ENST00000396610 RING1Q06587 406 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 NFKBIBQ15653 356 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 CYFIP1Q7L576 1253 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 CCDC84Q86UT8 332 aaPredicted RBP6.94□□□□□ -1.3
CMC1-202ENST00000396610 NT5DC4Q86YG4 428 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 SMYD4Q8IYR2 804 aaPredicted RBP6.94□□□□□ -1.3
CMC1-202ENST00000396610 GATAD2BQ8WXI9 593 aa6.94□□□□□ -1.3
CMC1-202ENST00000396610 ZFP64Q9NPA5 681 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms