RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 DOCK2Q92608 1830 aa20.14■□□□□ 0.81
CLTA-203ENST00000396603 COL2A1P02458 1487 aaPredicted RBP20.14■□□□□ 0.81
CLTA-203ENST00000396603 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.81
CLTA-203ENST00000396603 A0A0G2JLL6 359 aaPredicted RBP20.14■□□□□ 0.81
CLTA-203ENST00000396603 CTNND1O60716 968 aaKnown RBP20.14■□□□□ 0.81
CLTA-203ENST00000396603 IGSF3O75054 1194 aa20.14■□□□□ 0.81
CLTA-203ENST00000396603 TIMM10P62072 90 aa20.14■□□□□ 0.81
CLTA-203ENST00000396603 PRRT2Q7Z6L0 340 aaPredicted RBP20.14■□□□□ 0.81
CLTA-203ENST00000396603 ARHGAP39Q9C0H5 1083 aa20.14■□□□□ 0.81
CLTA-203ENST00000396603 ABCF2Q9UG63 623 aa20.14■□□□□ 0.81
CLTA-203ENST00000396603 GPR75-ASB3A0A0A6YYF3 556 aa20.13■□□□□ 0.81
CLTA-203ENST00000396603 TBC1D12O60347 775 aa20.13■□□□□ 0.81
CLTA-203ENST00000396603 PTPRAP18433 802 aa20.13■□□□□ 0.81
CLTA-203ENST00000396603 GSTO1P78417 241 aa20.13■□□□□ 0.81
CLTA-203ENST00000396603 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
CLTA-203ENST00000396603 ERICH6Q7L0X2 663 aa20.13■□□□□ 0.81
CLTA-203ENST00000396603 MYH2Q9UKX2 1941 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 GNAI2P04899 355 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 LDHCP07864 332 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 BCRP11274 1271 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 BTDP43251 543 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 PSMC4P43686 418 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 TFCP2Q12800 502 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 GPAT2Q6NUI2 795 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 ZFPM1Q8IX07 1006 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 NKX2-3Q8TAU0 364 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 CPA4Q9UI42 421 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 AFG3L2Q9Y4W6 797 aa20.12■□□□□ 0.81
CLTA-203ENST00000396603 KIAA0100Q14667 2235 aaKnown RBP20.12■□□□□ 0.81
CLTA-203ENST00000396603 TRIM27P14373 513 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 CAPN2P17655 700 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 ARID4AP29374 1257 aaPredicted RBP20.11■□□□□ 0.81
CLTA-203ENST00000396603 MECOMQ03112 1051 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 SH3BP5LQ7L8J4 393 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 ZSCAN29Q8IWY8 852 aaPredicted RBP20.11■□□□□ 0.81
CLTA-203ENST00000396603 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 TBC1D2Q9BYX2 928 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 ZHX2Q9Y6X8 837 aa20.11■□□□□ 0.81
CLTA-203ENST00000396603 OSBPP22059 807 aa20.1■□□□□ 0.81
CLTA-203ENST00000396603 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
CLTA-203ENST00000396603 DDTLA6NHG4 134 aaPredicted RBP20.09■□□□□ 0.81
CLTA-203ENST00000396603 FMNL1O95466 1100 aaPredicted RBP20.09■□□□□ 0.81
CLTA-203ENST00000396603 FCGRTP55899 365 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 RHBDL3P58872 404 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 SPATA5Q8NB90 893 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 RAET1EQ8TD07 263 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 NSUN4Q96CB9 384 aaKnown RBP20.09■□□□□ 0.81
CLTA-203ENST00000396603 GPR108Q9NPR9 543 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 DDX4Q9NQI0 724 aaKnown RBP20.09■□□□□ 0.81
CLTA-203ENST00000396603 HMG20BQ9P0W2 317 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 AK9Q5TCS8 1911 aa20.09■□□□□ 0.81
CLTA-203ENST00000396603 MYPNQ86TC9 1320 aa20.08■□□□□ 0.81
CLTA-203ENST00000396603 UQCRFS1P1P0C7P4 283 aa20.08■□□□□ 0.81
CLTA-203ENST00000396603 CTGFP29279 349 aa20.08■□□□□ 0.81
CLTA-203ENST00000396603 GRK4P32298 578 aa20.08■□□□□ 0.81
CLTA-203ENST00000396603 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.81
CLTA-203ENST00000396603 HABP4Q5JVS0 413 aaKnown RBP20.08■□□□□ 0.81
CLTA-203ENST00000396603 GORABQ5T7V8 394 aa20.08■□□□□ 0.81
CLTA-203ENST00000396603 NEUROD6Q96NK8 337 aa20.08■□□□□ 0.81
CLTA-203ENST00000396603 OSBPL5Q9H0X9 879 aaPredicted RBP20.08■□□□□ 0.81
CLTA-203ENST00000396603 DOCK1Q14185 1865 aa20.07■□□□□ 0.8
CLTA-203ENST00000396603 SLAIN1Q8ND83 568 aa20.07■□□□□ 0.8
CLTA-203ENST00000396603 ZSWIM8A7E2V4 1837 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 CYP2C8P10632 490 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 UBXN2AP68543 259 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 PICALMQ13492 652 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 PROCA1Q8NCQ7 364 aaPredicted RBP20.06■□□□□ 0.8
CLTA-203ENST00000396603 ZNF384Q8TF68 577 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 PNMA3Q9UL41 463 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 AGTPBP1Q9UPW5 1226 aa20.06■□□□□ 0.8
CLTA-203ENST00000396603 GJB1P08034 283 aa20.05■□□□□ 0.8
CLTA-203ENST00000396603 HERC5Q9UII4 1024 aaKnown RBP20.05■□□□□ 0.8
CLTA-203ENST00000396603 PNMA6EA0A0J9YXQ4 647 aa20.04■□□□□ 0.8
CLTA-203ENST00000396603 GJA8P48165 433 aa20.04■□□□□ 0.8
CLTA-203ENST00000396603 IRF5Q13568 498 aa20.04■□□□□ 0.8
CLTA-203ENST00000396603 ZKSCAN2Q63HK3 967 aa20.04■□□□□ 0.8
CLTA-203ENST00000396603 PXYLP1Q8TE99 480 aa20.04■□□□□ 0.8
CLTA-203ENST00000396603 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
CLTA-203ENST00000396603 DHX36Q9H2U1 1008 aaKnown RBP20.04■□□□□ 0.8
CLTA-203ENST00000396603 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLTA-203ENST00000396603 PLCG2P16885 1265 aa20.03■□□□□ 0.8
CLTA-203ENST00000396603 MCAMP43121 646 aa20.03■□□□□ 0.8
CLTA-203ENST00000396603 PRKCZQ05513 592 aa20.03■□□□□ 0.8
CLTA-203ENST00000396603 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.82e-7■■■■□ 20.2
CLTA-203ENST00000396603 POLA2Q14181 598 aa20.03■□□□□ 0.8
CLTA-203ENST00000396603 GADL1Q6ZQY3 521 aa20.03■□□□□ 0.8
CLTA-203ENST00000396603 SMCR8Q8TEV9 937 aaPredicted RBP20.03■□□□□ 0.8
CLTA-203ENST00000396603 FRAT1Q92837 279 aaPredicted RBP20.03■□□□□ 0.8
CLTA-203ENST00000396603 NOL10Q9BSC4 688 aaKnown RBP20.03■□□□□ 0.8
CLTA-203ENST00000396603 RAI14Q9P0K7 980 aa20.03■□□□□ 0.8
CLTA-203ENST00000396603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.03■□□□□ 0.8
CLTA-203ENST00000396603 PHIPQ8WWQ0 1821 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 PTPRFP10586 1907 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 TRIM75PA6NK02 468 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 BAG3O95817 575 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 MTFR1Q15390 333 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 FAM110CQ1W6H9 321 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 SSH3Q8TE77 659 aa20.02■□□□□ 0.8
CLTA-203ENST00000396603 SHISA4Q96DD7 197 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms