RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 MGEA5O60502 916 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 MAP2K2P36507 400 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.08
COL4A3-202ENST00000396578 ATP2A3Q93084 1043 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 PLIN2Q99541 437 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 ITSN2Q9NZM3 1697 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 PLCG2P16885 1265 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 MAGEB6Q8N7X4 407 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL4A3-202ENST00000396578 TSKSQ9UJT2 592 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 HGSO14964 777 aaPredicted RBP15.58■□□□□ 0.08
COL4A3-202ENST00000396578 SMTNP53814 917 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 CFAP221Q4G0U5 840 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 MAP3K21Q5TCX8 1036 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 VPS16Q9H269 839 aa15.58■□□□□ 0.08
COL4A3-202ENST00000396578 CUL4BQ13620 913 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 OGFOD1Q8N543 542 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 ASIC3Q9UHC3 531 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 WASLO00401 505 aaPredicted RBP15.57■□□□□ 0.08
COL4A3-202ENST00000396578 DAPK3O43293 454 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 SBNO2Q9Y2G9 1366 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 ABCC5O15440 1437 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 SLC9C1Q4G0N8 1177 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 PCDHB15Q9Y5E8 787 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
COL4A3-202ENST00000396578 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
COL4A3-202ENST00000396578 BIRC3Q13489 604 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 CARD6Q9BX69 1037 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 HAUS2Q9NVX0 235 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 OAS2P29728 719 aaKnown RBP15.57■□□□□ 0.08
COL4A3-202ENST00000396578 ATP8B2P98198 1209 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 RILPQ96NA2 401 aa15.57■□□□□ 0.08
COL4A3-202ENST00000396578 C8orf34Q49A92 452 aa15.56■□□□□ 0.08
COL4A3-202ENST00000396578 RSPH3Q86UC2 560 aa15.56■□□□□ 0.08
COL4A3-202ENST00000396578 DDX21Q9NR30 783 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL4A3-202ENST00000396578 PARP2Q9UGN5 583 aa15.56■□□□□ 0.08
COL4A3-202ENST00000396578 RNF113AO15541 343 aaKnown RBP15.56■□□□□ 0.08
COL4A3-202ENST00000396578 CCNT1O60563 726 aaKnown RBP15.56■□□□□ 0.08
COL4A3-202ENST00000396578 RBSNQ9H1K0 784 aa15.56■□□□□ 0.08
COL4A3-202ENST00000396578 CACYBPQ9HB71 228 aaKnown RBP15.56■□□□□ 0.08
COL4A3-202ENST00000396578 ANKRD20A3Q5VUR7 823 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 TRIM31Q9BZY9 425 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 MCM9Q9NXL9 1143 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 PDE4DQ08499 809 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 WHAMMQ8TF30 809 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 RAB17Q9H0T7 212 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 STK38LQ9Y2H1 464 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 IQGAP2Q13576 1575 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 SIRT1Q96EB6 747 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 ARHGEF11O15085 1522 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 TBC1D8O95759 1140 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 KRT15P19012 456 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 F8W031 263 aaPredicted RBP15.55■□□□□ 0.08
COL4A3-202ENST00000396578 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
COL4A3-202ENST00000396578 PARP1P09874 1014 aaKnown RBP15.55■□□□□ 0.08
COL4A3-202ENST00000396578 TMTC1Q8IUR5 882 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 PROCA1Q8NCQ7 364 aaPredicted RBP15.55■□□□□ 0.08
COL4A3-202ENST00000396578 RNF34Q969K3 372 aa15.55■□□□□ 0.08
COL4A3-202ENST00000396578 CCDC89Q8N998 374 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 WDR70Q9NW82 654 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 PAK1Q13153 545 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 RABEP2Q9H5N1 569 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 GABPAQ06546 454 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 BACH1O14867 736 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 FANCCQ00597 558 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 CASC4Q6P4E1 433 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 BAIAP2L1Q9UHR4 511 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 IQSEC3Q9UPP2 1182 aaPredicted RBP15.54■□□□□ 0.08
COL4A3-202ENST00000396578 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 PPP4R1Q8TF05 950 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 ALDH1L1O75891 902 aa15.54■□□□□ 0.08
COL4A3-202ENST00000396578 ZNF75DP51815 510 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 ZNF174Q15697 407 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 OPHN1O60890 802 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 KCNH3Q9ULD8 1083 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 HAUS3Q68CZ6 603 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 C16orf71Q8IYS4 520 aaPredicted RBP15.53■□□□□ 0.08
COL4A3-202ENST00000396578 MICAL1Q8TDZ2 1067 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 LLPHQ9BRT6 129 aaKnown RBP15.53■□□□□ 0.08
COL4A3-202ENST00000396578 Q9H521 79 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 PHF8Q9UPP1 1060 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 AFG3L2Q9Y4W6 797 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 SUDS3Q9H7L9 328 aaPredicted RBP15.53■□□□□ 0.08
COL4A3-202ENST00000396578 RAD50Q92878 1312 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 ARHGAP6O43182 974 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 RNF40O75150 1001 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 RXRAP19793 462 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 CCDC125Q86Z20 511 aa15.53■□□□□ 0.08
COL4A3-202ENST00000396578 FLOT1O75955 427 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 GCKP35557 465 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 LETM2Q2VYF4 491 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 TRIM68Q6AZZ1 485 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 MIER3Q7Z3K6 550 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 SPATS2Q86XZ4 545 aaKnown RBP15.52■□□□□ 0.08
COL4A3-202ENST00000396578 CCDC105Q8IYK2 499 aa15.52■□□□□ 0.08
COL4A3-202ENST00000396578 TROVE2P10155 538 aaKnown RBP eCLIP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms