RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 ZSCAN9O15535 394 aaPredicted RBP11□□□□□ -0.65
CDRT1-204ENST00000395906 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 MYLK4Q86YV6 388 aaPredicted RBP11□□□□□ -0.65
CDRT1-204ENST00000395906 CEP57L1Q8IYX8 460 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 B4GALNT2Q8NHY0 566 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 CAPS2Q9BXY5 557 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 SLC40A1Q9NP59 571 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11□□□□□ -0.65
CDRT1-204ENST00000395906 FLT4P35916 1363 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 IFIT2P09913 472 aaKnown RBP11□□□□□ -0.65
CDRT1-204ENST00000395906 THEMIS2Q5TEJ8 643 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 CCDC181Q5TID7 509 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 CWF19L1Q69YN2 538 aaKnown RBP11□□□□□ -0.65
CDRT1-204ENST00000395906 FAM177A1Q8N128 213 aaPredicted RBP11□□□□□ -0.65
CDRT1-204ENST00000395906 TBC1D5Q92609 795 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 OSBPL9Q96SU4 736 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 MIS18AQ9NYP9 233 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 ABCC4O15439 1325 aa11□□□□□ -0.65
CDRT1-204ENST00000395906 SLC30A9Q6PML9 568 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 AOPEPQ8N6M6 819 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 NUP133Q8WUM0 1156 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 TTC14Q96N46 770 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 XPO4Q9C0E2 1151 aaKnown RBP10.99□□□□□ -0.65
CDRT1-204ENST00000395906 PPP2R2CQ9Y2T4 447 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
CDRT1-204ENST00000395906 A6NNZ2 444 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 RPSAP08865 295 aaKnown RBP10.99□□□□□ -0.65
CDRT1-204ENST00000395906 PDHBP11177 359 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 RANBP1P43487 201 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 VSNL1P62760 191 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 TUBB2AQ13885 445 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 TUBB8Q3ZCM7 444 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 MIS18BP1Q6P0N0 1132 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 LEO1Q8WVC0 666 aaPredicted RBP10.99□□□□□ -0.65
CDRT1-204ENST00000395906 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 TUBB2BQ9BVA1 445 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 SLC39A2Q9NP94 309 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 G3BP2Q9UN86 482 aaKnown RBP10.99□□□□□ -0.65
CDRT1-204ENST00000395906 SAMM50Q9Y512 469 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 SBNO1A3KN83 1393 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 KDRP35968 1356 aa10.99□□□□□ -0.65
CDRT1-204ENST00000395906 KIF24Q5T7B8 1368 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 GRIN2DO15399 1336 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 ERICH2A1L162 156 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 PPP1R12BO60237 982 aaPredicted RBP10.98□□□□□ -0.65
CDRT1-204ENST00000395906 AK2P54819 239 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
CDRT1-204ENST00000395906 DRP2Q13474 957 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 RUFY3Q7L099 469 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 ARHGEF25Q86VW2 580 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 FAM81AQ8TBF8 368 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 TSGA10Q9BZW7 698 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 ZSWIM4Q9H7M6 989 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 TPCN1Q9ULQ1 816 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 OATP04181 439 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 TPP2P29144 1249 aaPredicted RBP10.98□□□□□ -0.65
CDRT1-204ENST00000395906 HSPA4P34932 840 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 MTHFSDQ2M296 383 aaKnown RBP10.98□□□□□ -0.65
CDRT1-204ENST00000395906 FAM228AQ86W67 206 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 CCDC13Q8IYE1 715 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 IFNKQ9P0W0 207 aa10.98□□□□□ -0.65
CDRT1-204ENST00000395906 CORO1CQ9ULV4 474 aaPredicted RBP10.98□□□□□ -0.65
CDRT1-204ENST00000395906 GOLGA6L7A0A1B0GV03 622 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 SPDYE3A6NKU9 549 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 ZEB2O60315 1214 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 POLD1P28340 1107 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 GNGT1P63211 74 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 ANKRD44Q8N8A2 993 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 IP6K1Q92551 441 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 SLX1AQ9BQ83 275 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 HPCAL4Q9UM19 191 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 PCDHGC5Q9Y5F6 944 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 ARHGAP6O43182 974 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 GCLCP48506 637 aaPredicted RBP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 ROR2Q01974 943 aaKnown RBP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 IFFO1Q0D2I5 559 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 E2F5Q15329 346 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 NFE2L2Q16236 605 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 CCDC178Q5BJE1 867 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 PRPF40BQ6NWY9 871 aaKnown RBP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 CYB5D1Q6P9G0 228 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 ARHGAP22Q7Z5H3 698 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 KCNH5Q8NCM2 988 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 CCDC12Q8WUD4 166 aaPredicted RBP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 SCLT1Q96NL6 688 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 RTEL1Q9NZ71 1219 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDRT1-204ENST00000395906 SRCAPQ6ZRS2 3230 aa10.97□□□□□ -0.65
CDRT1-204ENST00000395906 SPATA31A3Q5VYP0 1347 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 GOLGA6CA6NDK9 693 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 NDUFAB1O14561 156 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 GOLGA6DP0CG33 693 aa10.96□□□□□ -0.65
CDRT1-204ENST00000395906 PAPOLAP51003 745 aaKnown RBP10.96□□□□□ -0.65
CDRT1-204ENST00000395906 WDR93Q6P2C0 686 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms