RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 KRT82Q9NSB4 513 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 PCDHA4Q9UN74 947 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 R3HCC1Q9Y3T6 440 aaKnown RBP7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.22
HMGB1P10-201ENST00000395823 ERBB4Q15303 1308 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 DNAJA2O60884 412 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 NCLP19338 710 aaKnown RBP7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 ALAS2P22557 587 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 ILDR2Q71H61 639 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 C19orf47Q8N9M1 422 aaKnown RBP7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 WDR89Q96FK6 387 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 KLHDC7BQ96G42 594 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 DNAJC7Q99615 494 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 OSGEPQ9NPF4 335 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 GDF2Q9UK05 429 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 MAPK8IP1Q9UQF2 711 aa7.39□□□□□ -1.23
HMGB1P10-201ENST00000395823 A0A1W2PQH9 124 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 B2RBV5 119 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 CYP11A1P05108 521 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 POU4F3Q15319 338 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 Q6ZNB5 142 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 NPAS3Q8IXF0 933 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 GALNT11Q8NCW6 608 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 TMEM40Q8WWA1 233 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 ACSBG1Q96GR2 724 aa7.38□□□□□ -1.23
HMGB1P10-201ENST00000395823 UPK3BL1B0FP48 263 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 UPK3BL2E5RIL1 263 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 M0R082 166 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 ADAM11O75078 769 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 GJB6O95452 261 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 DLGAP3O95886 979 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 RASGRF1Q13972 1273 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 TTC6Q86TZ1 520 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 ZNF417Q8TAU3 575 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 SH3TC2Q8TF17 1288 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 GPATCH3Q96I76 525 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 ZNF587Q96SQ5 575 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 CORO1BQ9BR76 489 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 PCDHGC5Q9Y5F6 944 aa7.37□□□□□ -1.23
HMGB1P10-201ENST00000395823 PDPK1O15530 556 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 LILRB5O75023 590 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 ACRP10323 421 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 LIG1P18858 919 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 SRSF11Q05519 484 aaKnown RBP7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 PPP2R5EQ16537 467 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 FXNQ16595 210 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 KIF4BQ2VIQ3 1234 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 DIEXFQ68CQ4 756 aaKnown RBP7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 OVOS1Q6IE37 1185 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 MRM1Q6IN84 353 aaKnown RBP7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 FAM117BQ6P1L5 589 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 CYFIP1Q7L576 1253 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 REV1Q9UBZ9 1251 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 SNCAIPQ9Y6H5 919 aa7.36□□□□□ -1.23
HMGB1P10-201ENST00000395823 LOC100289279A0A1B0GTE1 492 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 DDX3YO15523 660 aaKnown RBP7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 ADAMTS2O95450 1211 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 GUCY2CP25092 1073 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 ARL4DP49703 201 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 NLRP12P59046 1061 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 ZYXQ15942 572 aaKnown RBP7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 MSL1Q68DK7 614 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 CHSY3Q70JA7 882 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 TM9SF2Q99805 663 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 PRDM6Q9NQX0 595 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 KCNK4Q9NYG8 393 aa7.35□□□□□ -1.23
HMGB1P10-201ENST00000395823 DCDC2CA8MYV0 355 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 SHISA8B8ZZ34 492 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 DEAF1O75398 565 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 NID1P14543 1247 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 CDK11BP21127 795 aaKnown RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 SQSTM1Q13501 440 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 PDE3AQ14432 1141 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 LRRFIP1Q32MZ4 808 aaKnown RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 FOXD4L6Q3SYB3 417 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 PLEKHG4Q58EX7 1191 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 ZC3H12AQ5D1E8 599 aaKnown RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 C6orf15Q6UXA7 325 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 FOXD4L3Q6VB84 417 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 HDXQ7Z353 690 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 ANKRD13AQ8IZ07 590 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 TAB3Q8N5C8 712 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 ATG4CQ96DT6 458 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 USP26Q9BXU7 913 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 GMIPQ9P107 970 aa7.34□□□□□ -1.23
HMGB1P10-201ENST00000395823 LTBP3Q9NS15 1303 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 SLC22A31A6NKX4 558 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 DIAPH1O60610 1272 aaKnown RBP7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 RING1Q06587 406 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 SUZ12Q15022 739 aaKnown RBP7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 TMEM201Q5SNT2 666 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 KLHL23Q8NBE8 558 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 EDARADDQ8WWZ3 215 aa7.33□□□□□ -1.24
HMGB1P10-201ENST00000395823 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms