RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZFYVE28Q9HCC9 887 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 PTPRFP10586 1907 aa22.25■■□□□ 1.15
CXCL12-204ENST00000395793 DDTLA6NHG4 134 aaPredicted RBP22.24■■□□□ 1.15
CXCL12-204ENST00000395793 ZBTB7BO15156 539 aaPredicted RBP22.24■■□□□ 1.15
CXCL12-204ENST00000395793 GORABQ5T7V8 394 aa22.24■■□□□ 1.15
CXCL12-204ENST00000395793 ITPRIPQ8IWB1 547 aa22.24■■□□□ 1.15
CXCL12-204ENST00000395793 FTSJ3Q8IY81 847 aaKnown RBP22.24■■□□□ 1.15
CXCL12-204ENST00000395793 PTPN22Q9Y2R2 807 aa22.24■■□□□ 1.15
CXCL12-204ENST00000395793 CDK5RAP2Q96SN8 1893 aa22.24■■□□□ 1.15
CXCL12-204ENST00000395793 RBBP6Q7Z6E9 1792 aaKnown RBP22.23■■□□□ 1.15
CXCL12-204ENST00000395793 GPR75-ASB3A0A0A6YYF3 556 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 PHF20L1A8MW92 1017 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 MOGSQ13724 837 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 TNNI3KQ59H18 835 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 NSUN4Q96CB9 384 aaKnown RBP22.23■■□□□ 1.15
CXCL12-204ENST00000395793 DBNDD2Q9BQY9 259 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 EFCC1Q9HA90 598 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 KCNH4Q9UQ05 1017 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 FPGT-TNNI3KV9GXZ4 949 aa22.23■■□□□ 1.15
CXCL12-204ENST00000395793 PICALMQ13492 652 aa22.22■■□□□ 1.15
CXCL12-204ENST00000395793 SLF2Q8IX21 1173 aa22.22■■□□□ 1.15
CXCL12-204ENST00000395793 ZCCHC17Q9NP64 241 aaKnown RBP22.22■■□□□ 1.15
CXCL12-204ENST00000395793 GPR108Q9NPR9 543 aa22.22■■□□□ 1.15
CXCL12-204ENST00000395793 SIPA1L1O43166 1804 aa22.22■■□□□ 1.15
CXCL12-204ENST00000395793 MAP3K10Q02779 954 aa22.21■■□□□ 1.15
CXCL12-204ENST00000395793 SNRKQ9NRH2 765 aa22.21■■□□□ 1.15
CXCL12-204ENST00000395793 TLR2O60603 784 aa22.2■■□□□ 1.14
CXCL12-204ENST00000395793 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
CXCL12-204ENST00000395793 UQCRFS1P1P0C7P4 283 aa22.2■■□□□ 1.14
CXCL12-204ENST00000395793 ZSCAN29Q8IWY8 852 aaPredicted RBP22.2■■□□□ 1.14
CXCL12-204ENST00000395793 PANK1Q8TE04 598 aa22.2■■□□□ 1.14
CXCL12-204ENST00000395793 NOP58Q9Y2X3 529 aaKnown RBP22.2■■□□□ 1.14
CXCL12-204ENST00000395793 ATAD5Q96QE3 1844 aa22.2■■□□□ 1.14
CXCL12-204ENST00000395793 OS9Q13438 667 aaPredicted RBP22.19■■□□□ 1.14
CXCL12-204ENST00000395793 ARHGAP39Q9C0H5 1083 aa22.19■■□□□ 1.14
CXCL12-204ENST00000395793 TLR7Q9NYK1 1049 aaKnown RBP22.19■■□□□ 1.14
CXCL12-204ENST00000395793 RAI14Q9P0K7 980 aa22.19■■□□□ 1.14
CXCL12-204ENST00000395793 ADGRA2Q96PE1 1338 aa22.19■■□□□ 1.14
CXCL12-204ENST00000395793 FOCADQ5VW36 1801 aa22.19■■□□□ 1.14
CXCL12-204ENST00000395793 CEP85Q6P2H3 762 aa22.18■■□□□ 1.14
CXCL12-204ENST00000395793 ANKRD23Q86SG2 305 aa22.18■■□□□ 1.14
CXCL12-204ENST00000395793 SCYL3Q8IZE3 742 aa22.18■■□□□ 1.14
CXCL12-204ENST00000395793 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.18■■□□□ 1.14
CXCL12-204ENST00000395793 COL2A1P02458 1487 aaPredicted RBP22.17■■□□□ 1.14
CXCL12-204ENST00000395793 KIAA0100Q14667 2235 aaKnown RBP22.17■■□□□ 1.14
CXCL12-204ENST00000395793 FAM196BA6NMK8 535 aa22.17■■□□□ 1.14
CXCL12-204ENST00000395793 GSTO1P78417 241 aa22.17■■□□□ 1.14
CXCL12-204ENST00000395793 TTC39AQ5SRH9 613 aa22.17■■□□□ 1.14
CXCL12-204ENST00000395793 GPAT2Q6NUI2 795 aa22.17■■□□□ 1.14
CXCL12-204ENST00000395793 DBNLQ9UJU6 430 aaKnown RBP22.17■■□□□ 1.14
CXCL12-204ENST00000395793 POTEFA5A3E0 1075 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 PDHXO00330 501 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 NPM3O75607 178 aaKnown RBP22.16■■□□□ 1.14
CXCL12-204ENST00000395793 CYP2E1P05181 493 aaPredicted RBP22.16■■□□□ 1.14
CXCL12-204ENST00000395793 LDHCP07864 332 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 PTPRAP18433 802 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 CTGFP29279 349 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 LACTBP83111 547 aaPredicted RBP22.16■■□□□ 1.14
CXCL12-204ENST00000395793 C17orf99Q6UX52 265 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 CCDC84Q86UT8 332 aaPredicted RBP22.16■■□□□ 1.14
CXCL12-204ENST00000395793 ARMC5Q96C12 935 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 LRP2BPQ9P2M1 347 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 PTCH2Q9Y6C5 1203 aa22.16■■□□□ 1.14
CXCL12-204ENST00000395793 ADGRA1Q86SQ6 560 aa22.15■■□□□ 1.14
CXCL12-204ENST00000395793 SH3RF3Q8TEJ3 882 aaPredicted RBP22.15■■□□□ 1.14
CXCL12-204ENST00000395793 EAF2Q96CJ1 260 aaPredicted RBP22.15■■□□□ 1.14
CXCL12-204ENST00000395793 CPA4Q9UI42 421 aa22.15■■□□□ 1.14
CXCL12-204ENST00000395793 ZHX2Q9Y6X8 837 aa22.15■■□□□ 1.14
CXCL12-204ENST00000395793 CENPFP49454 3210 aa22.15■■□□□ 1.14
CXCL12-204ENST00000395793 MGAMO43451 1857 aa22.14■■□□□ 1.13
CXCL12-204ENST00000395793 CXCL11O14625 94 aa22.14■■□□□ 1.13
CXCL12-204ENST00000395793 ECM2O94769 699 aaPredicted RBP22.14■■□□□ 1.13
CXCL12-204ENST00000395793 ZAP70P43403 619 aa22.14■■□□□ 1.13
CXCL12-204ENST00000395793 CCDC158Q5M9N0 1113 aa22.14■■□□□ 1.13
CXCL12-204ENST00000395793 ZNF512BQ96KM6 892 aaPredicted RBP22.14■■□□□ 1.13
CXCL12-204ENST00000395793 CCDC8Q9H0W5 538 aaPredicted RBP22.14■■□□□ 1.13
CXCL12-204ENST00000395793 OSBPL5Q9H0X9 879 aaPredicted RBP22.14■■□□□ 1.13
CXCL12-204ENST00000395793 PIH1D3Q9NQM4 214 aaKnown RBP22.14■■□□□ 1.13
CXCL12-204ENST00000395793 PICK1Q9NRD5 415 aa22.14■■□□□ 1.13
CXCL12-204ENST00000395793 AFG3L2Q9Y4W6 797 aa22.14■■□□□ 1.13
CXCL12-204ENST00000395793 A0A0G2JLL6 359 aaPredicted RBP22.13■■□□□ 1.13
CXCL12-204ENST00000395793 TBC1D12O60347 775 aa22.13■■□□□ 1.13
CXCL12-204ENST00000395793 PRRT2Q7Z6L0 340 aaPredicted RBP22.13■■□□□ 1.13
CXCL12-204ENST00000395793 TEX11Q8IYF3 940 aa22.13■■□□□ 1.13
CXCL12-204ENST00000395793 LOC285556D6RIA3 1793 aa22.12■■□□□ 1.13
CXCL12-204ENST00000395793 CTNND1O60716 968 aaKnown RBP22.12■■□□□ 1.13
CXCL12-204ENST00000395793 MAP4K4O95819 1239 aaPredicted RBP22.12■■□□□ 1.13
CXCL12-204ENST00000395793 RRP1BQ14684 758 aaKnown RBP22.12■■□□□ 1.13
CXCL12-204ENST00000395793 AATFQ9NY61 560 aaKnown RBP eCLIP22.12■■□□□ 1.13
CXCL12-204ENST00000395793 EXOC6BQ9Y2D4 811 aa22.12■■□□□ 1.13
CXCL12-204ENST00000395793 CYP2C8P10632 490 aa22.11■■□□□ 1.13
CXCL12-204ENST00000395793 NAA16Q6N069 864 aaPredicted RBP22.11■■□□□ 1.13
CXCL12-204ENST00000395793 ZNF333Q96JL9 665 aa22.11■■□□□ 1.13
CXCL12-204ENST00000395793 ARHGEF6Q15052 776 aa22.1■■□□□ 1.13
CXCL12-204ENST00000395793 TRIM47Q96LD4 638 aa22.1■■□□□ 1.13
CXCL12-204ENST00000395793 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.1■■□□□ 1.13
CXCL12-204ENST00000395793 NDUFB9Q9Y6M9 179 aa22.1■■□□□ 1.13
CXCL12-204ENST00000395793 BCRP11274 1271 aa22.09■■□□□ 1.13
CXCL12-204ENST00000395793 PPP4CP60510 307 aa22.09■■□□□ 1.13
CXCL12-204ENST00000395793 KIF22Q14807 665 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms