RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 GRM8O00222 908 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 CTAGE5O15320 804 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 SCRN1Q12765 414 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
RAPGEF3-202ENST00000395358 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 TRAF1Q13077 416 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 G3V3G9 751 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 BIN1O00499 593 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 CCDC151A5D8V7 595 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 KCNQ2O43526 872 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 STK3Q13188 491 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 RABGGTAQ92696 567 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 METTL22Q9BUU2 404 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 SKAP2O75563 359 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 SNCBQ16143 134 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 MPHOSPH8Q99549 860 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 BAIAP2L1Q9UHR4 511 aa12.88□□□□□ -0.35
RAPGEF3-202ENST00000395358 AP1G2O75843 785 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 PLEKHM2Q8IWE5 1019 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 KIRREL3Q8IZU9 778 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 TBC1D22AQ8WUA7 517 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 MCM3P25205 808 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 YIPF3Q9GZM5 350 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 SIL1Q9H173 461 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 NEFHP12036 1026 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 RBM5P52756 815 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 NEUROD6Q96NK8 337 aa12.87□□□□□ -0.35
RAPGEF3-202ENST00000395358 RNF40O75150 1001 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 TXLNAP40222 546 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 GNGT1P63211 74 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 RIPOR2Q9Y4F9 1068 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 AP5Z1O43299 807 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 TBC1D8O95759 1140 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 ZSCAN16Q9H4T2 348 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
RAPGEF3-202ENST00000395358 PPP1R12BO60237 982 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 PROSER3Q2NL68 480 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 CPLX2Q6PUV4 134 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 TDRD7Q8NHU6 1098 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 JAKMIP1Q96N16 626 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 LTN1O94822 1766 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 ODF2Q5BJF6 829 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 LZTFL1Q9NQ48 299 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 CRYMQ14894 314 aa12.85□□□□□ -0.35
RAPGEF3-202ENST00000395358 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 IGHMBP2P38935 993 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 TTLL7Q6ZT98 887 aa12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 GSCP56915 257 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 PPFIBP1Q86W92 1011 aa12.84□□□□□ -0.35
RAPGEF3-202ENST00000395358 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 MAP4K4O95819 1239 aaPredicted RBP12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 SLC8A1P32418 973 aa12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 KCNQ4P56696 695 aa12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 TPTE2Q6XPS3 522 aa12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 CAPS2Q9BXY5 557 aa12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 ABCC6O95255 1503 aa12.83□□□□□ -0.35
RAPGEF3-202ENST00000395358 KIF5BP33176 963 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms