RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ZDHHC15Q96MV8 337 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 MYOZ2Q9NPC6 264 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 DAGLAQ9Y4D2 1042 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 GAKO14976 1311 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 GNAT2P19087 354 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 TOB2Q14106 344 aaPredicted RBP22.8■■□□□ 1.24
LMNB1-202ENST00000395354 DLGAP5Q15398 846 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 RBM26Q5T8P6 1007 aaKnown RBP22.8■■□□□ 1.24
LMNB1-202ENST00000395354 SAMD7Q7Z3H4 446 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 PCDHAC2Q9Y5I4 1007 aa22.8■■□□□ 1.24
LMNB1-202ENST00000395354 GPR75-ASB3A0A0A6YYF3 556 aa22.79■■□□□ 1.24
LMNB1-202ENST00000395354 MIGA1Q8NAN2 632 aa22.79■■□□□ 1.24
LMNB1-202ENST00000395354 TPCN1Q9ULQ1 816 aa22.79■■□□□ 1.24
LMNB1-202ENST00000395354 MAST2Q6P0Q8 1798 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 PATL2C9JE40 543 aaKnown RBP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 ZNF213O14771 459 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 BAG3O95817 575 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 EXOSC10Q01780 885 aaKnown RBP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 ME3Q16798 604 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 TBC1D10BQ4KMP7 808 aaPredicted RBP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 APOBEC3HQ6NTF7 200 aaKnown RBP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 FBXL16Q8N461 479 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 MTMR14Q8NCE2 650 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 PRMT6Q96LA8 375 aaPredicted RBP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 NOL10Q9BSC4 688 aaKnown RBP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 AATFQ9NY61 560 aaKnown RBP eCLIP22.78■■□□□ 1.24
LMNB1-202ENST00000395354 HACL1Q9UJ83 578 aa22.78■■□□□ 1.24
LMNB1-202ENST00000395354 MAGEB6P1A0A0J9YX57 407 aa22.77■■□□□ 1.24
LMNB1-202ENST00000395354 BTDP43251 543 aa22.77■■□□□ 1.24
LMNB1-202ENST00000395354 AGXT2Q9BYV1 514 aa22.77■■□□□ 1.24
LMNB1-202ENST00000395354 SPDYE2BA6NHP3 402 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 LARGE1O95461 756 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 EGFRP00533 1210 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 SPDYE6P0CI01 402 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 PDIA4P13667 645 aaKnown RBP22.76■■□□□ 1.23
LMNB1-202ENST00000395354 PPP4CP60510 307 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 DYNLL1P63167 89 aaKnown RBP22.76■■□□□ 1.23
LMNB1-202ENST00000395354 COL9A3Q14050 684 aaPredicted RBP22.76■■□□□ 1.23
LMNB1-202ENST00000395354 ADARB2Q9NS39 739 aaKnown RBP22.76■■□□□ 1.23
LMNB1-202ENST00000395354 SMC3Q9UQE7 1217 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 IQCA1LA6NCM1 817 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 POTECB2RU33 542 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 BRD1O95696 1058 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 KIF4BQ2VIQ3 1234 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 Q6ZUG5 572 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 ZBED3Q96IU2 234 aaPredicted RBP22.76■■□□□ 1.23
LMNB1-202ENST00000395354 LARP6Q9BRS8 491 aaKnown RBP22.76■■□□□ 1.23
LMNB1-202ENST00000395354 ZDHHC9Q9Y397 364 aa22.76■■□□□ 1.23
LMNB1-202ENST00000395354 WDR19Q8NEZ3 1342 aa22.75■■□□□ 1.23
LMNB1-202ENST00000395354 WNT10BO00744 389 aa22.75■■□□□ 1.23
LMNB1-202ENST00000395354 MBD4O95243 580 aa22.75■■□□□ 1.23
LMNB1-202ENST00000395354 CCDC83Q8IWF9 413 aa22.75■■□□□ 1.23
LMNB1-202ENST00000395354 ZNF526Q8TF50 670 aaPredicted RBP22.75■■□□□ 1.23
LMNB1-202ENST00000395354 RIOK1Q9BRS2 568 aaKnown RBP22.75■■□□□ 1.23
LMNB1-202ENST00000395354 LAMA4Q16363 1823 aa22.75■■□□□ 1.23
LMNB1-202ENST00000395354 ADAMTSL1Q8N6G6 1762 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 EPHX2P34913 555 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 PKP1Q13835 747 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 NBPF9Q3BBW0 867 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 TRPM4Q8TD43 1214 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 TCEANC2Q96MN5 208 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 ARMT1Q9H993 441 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 RRAGCQ9HB90 399 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 USP40Q9NVE5 1235 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 WDR90Q96KV7 1748 aa22.74■■□□□ 1.23
LMNB1-202ENST00000395354 GOLGA6L22H0YM25 854 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 BAG4O95429 457 aaKnown RBP22.73■■□□□ 1.23
LMNB1-202ENST00000395354 APPP05067 770 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 CDC42EP5Q6NZY7 148 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 LCORLQ8N3X6 602 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 NCOA7Q8NI08 942 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 CHMP4CQ96CF2 233 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 NACAP1Q9BZK3 213 aa22.73■■□□□ 1.23
LMNB1-202ENST00000395354 TDRD3Q9H7E2 651 aaKnown RBP22.73■■□□□ 1.23
LMNB1-202ENST00000395354 WDR33Q9C0J8 1336 aaKnown RBP22.73■■□□□ 1.23
LMNB1-202ENST00000395354 SCN4AP35499 1836 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 MYO1BO43795 1136 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 VEGFAP15692 232 aaPredicted RBP22.72■■□□□ 1.23
LMNB1-202ENST00000395354 PLCG2P16885 1265 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 HIRAP54198 1017 aaPredicted RBP22.72■■□□□ 1.23
LMNB1-202ENST00000395354 RHBDL3P58872 404 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 ST3GAL1Q11201 340 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 CERS3Q8IU89 383 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 IFNL3Q8IZI9 196 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 SH3RF3Q8TEJ3 882 aaPredicted RBP22.72■■□□□ 1.23
LMNB1-202ENST00000395354 TAF1DQ9H5J8 278 aaPredicted RBP22.72■■□□□ 1.23
LMNB1-202ENST00000395354 FGD1P98174 961 aa22.72■■□□□ 1.23
LMNB1-202ENST00000395354 GSG1L2A8MUP6 293 aa22.71■■□□□ 1.23
LMNB1-202ENST00000395354 MCM5P33992 734 aa22.71■■□□□ 1.23
LMNB1-202ENST00000395354 HAND2P61296 217 aa22.71■■□□□ 1.23
LMNB1-202ENST00000395354 USP50Q70EL3 339 aaPredicted RBP22.71■■□□□ 1.23
LMNB1-202ENST00000395354 MB21D2Q8IYB1 491 aaPredicted RBP22.71■■□□□ 1.23
LMNB1-202ENST00000395354 NAPBQ9H115 298 aa22.71■■□□□ 1.23
LMNB1-202ENST00000395354 TRDNQ13061 729 aa22.7■■□□□ 1.22
LMNB1-202ENST00000395354 RALYLQ86SE5 291 aaKnown RBP22.7■■□□□ 1.22
LMNB1-202ENST00000395354 TEX11Q8IYF3 940 aa22.7■■□□□ 1.22
LMNB1-202ENST00000395354 BRF1Q92994 677 aa22.7■■□□□ 1.22
LMNB1-202ENST00000395354 CRNKL1Q9BZJ0 848 aaKnown RBP22.7■■□□□ 1.22
LMNB1-202ENST00000395354 NMRK2Q9NPI5 230 aa22.7■■□□□ 1.22
LMNB1-202ENST00000395354 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms