RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 ZNF304Q9HCX3 659 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 IQCA1LA6NCM1 817 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 C2orf81A6NN90 581 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 VWA3BQ502W6 1294 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 DZIP1LQ8IYY4 767 aaKnown RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 TSGA13Q96PP4 275 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 DBNDD1Q9H9R9 158 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 MKL2Q9ULH7 1088 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 BARX2Q9UMQ3 279 aaPredicted RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 hCG_1642624A0A1W2PR95 340 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 SYNDIG1LA6NDD5 238 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 TRIM64A6NGJ6 449 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 TRIM64BA6NI03 449 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 SETSIPP0DME0 302 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 CLCN1P35523 988 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 PRPF4BQ13523 1007 aaKnown RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 SRLQ86TD4 932 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 STK11IPQ8N1F8 1099 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 SCHIP1Q9P0W5 487 aaPredicted RBP4.92□□□□□ -1.62
HERC4-204ENST00000395198 CHIC2Q9UKJ5 165 aa4.92□□□□□ -1.62
HERC4-204ENST00000395198 RNF123Q5XPI4 1314 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 GFPT2O94808 682 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 USP17L8P0C7I0 530 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TYRP1P17643 537 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 SH3BGRP55822 239 aaPredicted RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 NUGGCQ68CJ6 796 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TMC4Q7Z404 712 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 DESI2Q9BSY9 194 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 SLC13A1Q9BZW2 595 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 NCOA5Q9HCD5 579 aaKnown RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 PCSK1NQ9UHG2 260 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 DGKBQ9Y6T7 804 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 MTUS2Q5JR59 1369 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 CCDC85CA6NKD9 419 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 EIF3FO00303 357 aaPredicted RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 MUSKO15146 869 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 WTAPQ15007 396 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 MUM1Q2TAK8 710 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TBC1D25Q3MII6 688 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 C6orf118Q5T5N4 469 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 SFMBT2Q5VUG0 894 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 XRRA1Q6P2D8 792 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TMEM110Q86TL2 294 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 THNSL2Q86YJ6 484 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 FAM212AQ96EL1 285 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 BAG1Q99933 345 aaPredicted RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 KATNAL1Q9BW62 490 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 CDH19Q9H159 772 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 UNC45AQ9H3U1 944 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 APAF1O14727 1248 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 ETFBP38117 255 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 GJA8P48165 433 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 DAB2P98082 770 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 MRPL28Q13084 256 aaKnown RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 KIF4BQ2VIQ3 1234 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 SPDYCQ5MJ68 293 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 KRT26Q7Z3Y9 468 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 LSMEM1Q8N8F7 131 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 EPS8L1Q8TE68 723 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 DEPDC7Q96QD5 511 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 STRBPQ96SI9 672 aaKnown RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 DNAJC7Q99615 494 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TCHPQ9BT92 498 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TMEM260Q9NX78 707 aa4.91□□□□□ -1.62
HERC4-204ENST00000395198 TDRD9Q8NDG6 1382 aaKnown RBP4.91□□□□□ -1.62
HERC4-204ENST00000395198 KLHL41O60662 606 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 IFIT2P09913 472 aaKnown RBP4.9□□□□□ -1.62
HERC4-204ENST00000395198 SKIV2L2P42285 1042 aaKnown RBP4.9□□□□□ -1.62
HERC4-204ENST00000395198 CHMP4BP1P59074 171 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 RAC1P63000 192 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 DDX10Q13206 875 aaKnown RBP4.9□□□□□ -1.62
HERC4-204ENST00000395198 CCDC191Q8NCU4 936 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 APPBP2Q92624 585 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 NLRP3Q96P20 1036 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 ALG1Q9BT22 464 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 CAPS2Q9BXY5 557 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 PNNQ9H307 717 aaKnown RBP4.9□□□□□ -1.62
HERC4-204ENST00000395198 KCTD10Q9H3F6 313 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 SENP2Q9HC62 589 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 CNPY2Q9Y2B0 182 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 KIF27Q86VH2 1401 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 H0YHG0 523 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 KLF4O43474 513 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 PAHP00439 452 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 GNRH1P01148 92 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 SLC5A1P13866 664 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 ATP6V1AP38606 617 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 KCNJ4P48050 445 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 SARNPP82979 210 aaKnown RBP4.9□□□□□ -1.62
HERC4-204ENST00000395198 FMR1Q06787 632 aaKnown RBP eCLIP4.9□□□□□ -1.62
HERC4-204ENST00000395198 STK3Q13188 491 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 RASA2Q15283 850 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 TBC1D1Q86TI0 1168 aaPredicted RBP4.9□□□□□ -1.62
HERC4-204ENST00000395198 SLC7A5P1Q8MH63 180 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 ZNF710Q8N1W2 664 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 GMCL1Q96IK5 515 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 PFDN2Q9UHV9 154 aa4.9□□□□□ -1.62
HERC4-204ENST00000395198 SERTM1A2A2V5 107 aa4.9□□□□□ -1.63
HERC4-204ENST00000395198 FAM221AA4D161 298 aa4.9□□□□□ -1.63
HERC4-204ENST00000395198 SPDYE16A6NNV3 312 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms