RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 MMP10P09238 476 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 SDSP20132 328 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 TIMM10P62072 90 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.19
RTN1-203ENST00000395090 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 GPATCH3Q96I76 525 aa13.9□□□□□ -0.19
RTN1-203ENST00000395090 TLR7Q9NYK1 1049 aaKnown RBP13.9□□□□□ -0.19
RTN1-203ENST00000395090 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.19
RTN1-203ENST00000395090 LRP5O75197 1615 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 A0A1B0GUL7 405 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 ATP5JP18859 108 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 METTL24Q5JXM2 366 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 IFFO2Q5TF58 517 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 SLC16A10Q8TF71 515 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 BRIP1Q9BX63 1249 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
RTN1-203ENST00000395090 HOXA10P31260 410 aaPredicted RBP13.88□□□□□ -0.19
RTN1-203ENST00000395090 RPIAP49247 311 aa13.88□□□□□ -0.19
RTN1-203ENST00000395090 C4orf48Q5BLP8 95 aa13.88□□□□□ -0.19
RTN1-203ENST00000395090 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
RTN1-203ENST00000395090 CELF1Q92879 486 aaKnown RBP13.88□□□□□ -0.19
RTN1-203ENST00000395090 DBNDD2Q9BQY9 259 aa13.88□□□□□ -0.19
RTN1-203ENST00000395090 NRXN2Q9P2S2 1712 aa13.88□□□□□ -0.19
RTN1-203ENST00000395090 FGFR2P21802 821 aa13.87□□□□□ -0.19
RTN1-203ENST00000395090 ZNF609O15014 1411 aa13.87□□□□□ -0.19
RTN1-203ENST00000395090 RFX1P22670 979 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 TBC1D9Q6ZT07 1266 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
RTN1-203ENST00000395090 MINPP1Q9UNW1 487 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 WNT7BP56706 349 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 CHRNDQ07001 517 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 GRAPQ13588 217 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 MSL1Q68DK7 614 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 GRAPLQ8TC17 118 aaPredicted RBP13.86□□□□□ -0.19
RTN1-203ENST00000395090 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 COL4A1P02462 1669 aa13.86□□□□□ -0.19
RTN1-203ENST00000395090 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
RTN1-203ENST00000395090 ATP9BO43861 1147 aa13.85□□□□□ -0.19
RTN1-203ENST00000395090 CDC45O75419 566 aa13.85□□□□□ -0.19
RTN1-203ENST00000395090 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
RTN1-203ENST00000395090 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
RTN1-203ENST00000395090 SLFNL1Q499Z3 407 aa13.85□□□□□ -0.19
RTN1-203ENST00000395090 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.85□□□□□ -0.19
RTN1-203ENST00000395090 LPIN2Q92539 896 aa13.85□□□□□ -0.19
RTN1-203ENST00000395090 ZNF512BQ96KM6 892 aaPredicted RBP13.85□□□□□ -0.19
RTN1-203ENST00000395090 CRAMP1Q96RY5 1269 aa13.85□□□□□ -0.19
RTN1-203ENST00000395090 MAFBQ9Y5Q3 323 aaPredicted RBP13.85□□□□□ -0.19
RTN1-203ENST00000395090 CASZ1Q86V15 1759 aa13.84□□□□□ -0.19
RTN1-203ENST00000395090 PIK3CDO00329 1044 aa13.84□□□□□ -0.19
RTN1-203ENST00000395090 BBOX1O75936 387 aa13.84□□□□□ -0.19
RTN1-203ENST00000395090 PDE6BP35913 854 aa13.84□□□□□ -0.19
RTN1-203ENST00000395090 RPGRQ92834 1020 aaKnown RBP13.84□□□□□ -0.19
RTN1-203ENST00000395090 SLC10A4Q96EP9 437 aa13.84□□□□□ -0.19
RTN1-203ENST00000395090 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
RTN1-203ENST00000395090 C1QTNF2Q9BXJ5 285 aa13.84□□□□□ -0.19
RTN1-203ENST00000395090 TAF5LO75529 589 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 CD2BP2O95400 341 aaKnown RBP13.83□□□□□ -0.2
RTN1-203ENST00000395090 SRGNP10124 158 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 ADORA1P30542 326 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 PBXIP1Q96AQ6 731 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 EVI5LQ96CN4 794 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 HAUS7Q99871 368 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 ANKRD2Q9GZV1 360 aa13.83□□□□□ -0.2
RTN1-203ENST00000395090 UBE4AQ14139 1066 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 CCDC158Q5M9N0 1113 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 CNTROBQ8N137 903 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 BOLA2Q9H3K6 86 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 RBM19Q9Y4C8 960 aaKnown RBP13.82□□□□□ -0.2
RTN1-203ENST00000395090 TAF1P21675 1872 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 SLC5A1P13866 664 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 NPR1P16066 1061 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 SKOR1P84550 965 aa13.82□□□□□ -0.2
RTN1-203ENST00000395090 EIF5BO60841 1220 aaKnown RBP13.81□□□□□ -0.2
RTN1-203ENST00000395090 SKIP12755 728 aa13.81□□□□□ -0.2
RTN1-203ENST00000395090 CHMLP26374 656 aa13.81□□□□□ -0.2
RTN1-203ENST00000395090 GORABQ5T7V8 394 aa13.81□□□□□ -0.2
RTN1-203ENST00000395090 TMC4Q7Z404 712 aa13.81□□□□□ -0.2
RTN1-203ENST00000395090 RNF135Q8IUD6 432 aa13.81□□□□□ -0.2
RTN1-203ENST00000395090 TRMT44Q8IYL2 757 aaKnown RBP13.81□□□□□ -0.2
RTN1-203ENST00000395090 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
RTN1-203ENST00000395090 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.8□□□□□ -0.2
RTN1-203ENST00000395090 SNAP23O00161 211 aa13.8□□□□□ -0.2
RTN1-203ENST00000395090 MAP4K4O95819 1239 aaPredicted RBP13.8□□□□□ -0.2
RTN1-203ENST00000395090 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
RTN1-203ENST00000395090 VARSP26640 1264 aaKnown RBP13.8□□□□□ -0.2
RTN1-203ENST00000395090 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
RTN1-203ENST00000395090 LIAT1Q6ZQX7 453 aa13.8□□□□□ -0.2
RTN1-203ENST00000395090 FAM174AQ8TBP5 190 aa13.8□□□□□ -0.2
RTN1-203ENST00000395090 ALDH1B1P30837 517 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 PHTF2Q8N3S3 785 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
RTN1-203ENST00000395090 UQCRFS1P1P0C7P4 283 aa13.79□□□□□ -0.2
RTN1-203ENST00000395090 ARID4AP29374 1257 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms