RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 ZBTB22O15209 634 aa24.6■■□□□ 1.53
UPK3B-203ENST00000394849 TFRCP02786 760 aaKnown RBP24.6■■□□□ 1.53
UPK3B-203ENST00000394849 PTPRAP18433 802 aa24.6■■□□□ 1.53
UPK3B-203ENST00000394849 FLT3LGP49771 235 aa24.6■■□□□ 1.53
UPK3B-203ENST00000394849 ZGPATQ8N5A5 531 aaKnown RBP24.6■■□□□ 1.53
UPK3B-203ENST00000394849 IDI2Q9BXS1 227 aa24.6■■□□□ 1.53
UPK3B-203ENST00000394849 USP44Q9H0E7 712 aa24.6■■□□□ 1.53
UPK3B-203ENST00000394849 DOCK2Q92608 1830 aa24.59■■□□□ 1.53
UPK3B-203ENST00000394849 TNPO2O14787 897 aaKnown RBP24.59■■□□□ 1.53
UPK3B-203ENST00000394849 PRDX5P30044 214 aa24.59■■□□□ 1.53
UPK3B-203ENST00000394849 SLC17A8Q8NDX2 589 aa24.59■■□□□ 1.53
UPK3B-203ENST00000394849 SMCR8Q8TEV9 937 aaPredicted RBP24.59■■□□□ 1.53
UPK3B-203ENST00000394849 DENND2AQ9ULE3 1009 aa24.59■■□□□ 1.53
UPK3B-203ENST00000394849 AFG3L2Q9Y4W6 797 aa24.59■■□□□ 1.53
UPK3B-203ENST00000394849 CTNND1O60716 968 aaKnown RBP24.58■■□□□ 1.53
UPK3B-203ENST00000394849 INHAP05111 366 aa24.58■■□□□ 1.53
UPK3B-203ENST00000394849 MAP3K10Q02779 954 aa24.58■■□□□ 1.53
UPK3B-203ENST00000394849 LRRFIP2Q9Y608 721 aaKnown RBP24.58■■□□□ 1.53
UPK3B-203ENST00000394849 ATRNL1Q5VV63 1379 aa24.57■■□□□ 1.52
UPK3B-203ENST00000394849 RFX5P48382 616 aaPredicted RBP24.57■■□□□ 1.52
UPK3B-203ENST00000394849 GADL1Q6ZQY3 521 aa24.57■■□□□ 1.52
UPK3B-203ENST00000394849 SLF2Q8IX21 1173 aa24.57■■□□□ 1.52
UPK3B-203ENST00000394849 MRPL50Q8N5N7 158 aaKnown RBP24.57■■□□□ 1.52
UPK3B-203ENST00000394849 COA7Q96BR5 231 aa24.57■■□□□ 1.52
UPK3B-203ENST00000394849 PAK6Q9NQU5 681 aaPredicted RBP24.57■■□□□ 1.52
UPK3B-203ENST00000394849 CIAO1O76071 339 aa24.56■■□□□ 1.52
UPK3B-203ENST00000394849 RGS3P49796 1198 aa24.56■■□□□ 1.52
UPK3B-203ENST00000394849 DEFB118Q96PH6 123 aa24.56■■□□□ 1.52
UPK3B-203ENST00000394849 CRISPLD2Q9H0B8 497 aa24.56■■□□□ 1.52
UPK3B-203ENST00000394849 CEP126Q9P2H0 1117 aa24.56■■□□□ 1.52
UPK3B-203ENST00000394849 PTPRFP10586 1907 aa24.56■■□□□ 1.52
UPK3B-203ENST00000394849 MYH2Q9UKX2 1941 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 DLL1O00548 723 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 ELNP15502 786 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 ATP2B3Q16720 1220 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 ATG9AQ7Z3C6 839 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 ZSCAN29Q8IWY8 852 aaPredicted RBP24.55■■□□□ 1.52
UPK3B-203ENST00000394849 ZFPM1Q8IX07 1006 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 PNMA3Q9UL41 463 aa24.55■■□□□ 1.52
UPK3B-203ENST00000394849 A0A0C4DFX4 3053 aa24.54■■□□□ 1.52
UPK3B-203ENST00000394849 COL6A3P12111 3177 aa24.54■■□□□ 1.52
UPK3B-203ENST00000394849 NECAB2Q7Z6G3 386 aa24.54■■□□□ 1.52
UPK3B-203ENST00000394849 ANKLE1Q8NAG6 615 aa24.54■■□□□ 1.52
UPK3B-203ENST00000394849 AGTPBP1Q9UPW5 1226 aa24.54■■□□□ 1.52
UPK3B-203ENST00000394849 GAKO14976 1311 aa24.54■■□□□ 1.52
UPK3B-203ENST00000394849 DOCK1Q14185 1865 aa24.53■■□□□ 1.52
UPK3B-203ENST00000394849 GPR153Q6NV75 609 aa24.53■■□□□ 1.52
UPK3B-203ENST00000394849 BMP8BP34820 402 aa24.52■■□□□ 1.52
UPK3B-203ENST00000394849 FAM110CQ1W6H9 321 aa24.52■■□□□ 1.52
UPK3B-203ENST00000394849 FAM163AQ96GL9 167 aaPredicted RBP24.52■■□□□ 1.52
UPK3B-203ENST00000394849 HDAC5Q9UQL6 1122 aa24.52■■□□□ 1.52
UPK3B-203ENST00000394849 LAMA3Q16787 3333 aa24.51■■□□□ 1.51
UPK3B-203ENST00000394849 DOCK3Q8IZD9 2030 aa24.51■■□□□ 1.51
UPK3B-203ENST00000394849 SPTY2D1Q68D10 685 aaPredicted RBP24.51■■□□□ 1.51
UPK3B-203ENST00000394849 DZIP1Q86YF9 867 aaKnown RBP24.51■■□□□ 1.51
UPK3B-203ENST00000394849 PAWRQ96IZ0 340 aaKnown RBP24.51■■□□□ 1.51
UPK3B-203ENST00000394849 TBC1D2Q9BYX2 928 aa24.51■■□□□ 1.51
UPK3B-203ENST00000394849 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
UPK3B-203ENST00000394849 PHIPQ8WWQ0 1821 aa24.51■■□□□ 1.51
UPK3B-203ENST00000394849 RFX7Q2KHR2 1363 aa24.51■■□□□ 1.51
UPK3B-203ENST00000394849 TRIM75PA6NK02 468 aa24.5■■□□□ 1.51
UPK3B-203ENST00000394849 TBC1D12O60347 775 aa24.5■■□□□ 1.51
UPK3B-203ENST00000394849 IL15P40933 162 aaPredicted RBP24.5■■□□□ 1.51
UPK3B-203ENST00000394849 GCLCP48506 637 aaPredicted RBP24.5■■□□□ 1.51
UPK3B-203ENST00000394849 ANKRD13CQ8N6S4 541 aa24.5■■□□□ 1.51
UPK3B-203ENST00000394849 PROCA1Q8NCQ7 364 aaPredicted RBP24.5■■□□□ 1.51
UPK3B-203ENST00000394849 STAP2Q9UGK3 403 aa24.5■■□□□ 1.51
UPK3B-203ENST00000394849 NPM3O75607 178 aaKnown RBP24.49■■□□□ 1.51
UPK3B-203ENST00000394849 PABPC4Q13310 644 aaKnown RBP eCLIP24.49■■□□□ 1.51
UPK3B-203ENST00000394849 SH3BP5LQ7L8J4 393 aa24.49■■□□□ 1.51
UPK3B-203ENST00000394849 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.49■■□□□ 1.51
UPK3B-203ENST00000394849 TAOK2Q9UL54 1235 aa24.49■■□□□ 1.51
UPK3B-203ENST00000394849 PHKA1P46020 1223 aa24.48■■□□□ 1.51
UPK3B-203ENST00000394849 SIL1Q9H173 461 aa24.48■■□□□ 1.51
UPK3B-203ENST00000394849 ZNF521Q96K83 1311 aa24.47■■□□□ 1.51
UPK3B-203ENST00000394849 DDTLA6NHG4 134 aaPredicted RBP24.47■■□□□ 1.51
UPK3B-203ENST00000394849 MAP4K4O95819 1239 aaPredicted RBP24.47■■□□□ 1.51
UPK3B-203ENST00000394849 HMGCRP04035 888 aa24.47■■□□□ 1.51
UPK3B-203ENST00000394849 SOX1O00570 391 aaPredicted RBP24.46■■□□□ 1.51
UPK3B-203ENST00000394849 UBTFL1P0CB47 393 aaPredicted RBP24.46■■□□□ 1.51
UPK3B-203ENST00000394849 CCDC102BQ68D86 513 aa24.46■■□□□ 1.51
UPK3B-203ENST00000394849 SSH1Q8WYL5 1049 aa24.46■■□□□ 1.51
UPK3B-203ENST00000394849 GDF15Q99988 308 aa24.46■■□□□ 1.51
UPK3B-203ENST00000394849 OSBPL5Q9H0X9 879 aaPredicted RBP24.46■■□□□ 1.51
UPK3B-203ENST00000394849 ALPK3Q96L96 1907 aa24.45■■□□□ 1.51
UPK3B-203ENST00000394849 RPTORQ8N122 1335 aa24.45■■□□□ 1.5
UPK3B-203ENST00000394849 MNX1P50219 401 aaPredicted RBP24.45■■□□□ 1.5
UPK3B-203ENST00000394849 LRCH3Q96II8 777 aa24.45■■□□□ 1.5
UPK3B-203ENST00000394849 NBPF3Q9H094 633 aa24.45■■□□□ 1.5
UPK3B-203ENST00000394849 HMX1Q9NP08 348 aaPredicted RBP24.45■■□□□ 1.5
UPK3B-203ENST00000394849 ABCF2Q9UG63 623 aa24.45■■□□□ 1.5
UPK3B-203ENST00000394849 CUL9Q8IWT3 2517 aa24.45■■□□□ 1.5
UPK3B-203ENST00000394849 BTDP43251 543 aa24.44■■□□□ 1.5
UPK3B-203ENST00000394849 PICALMQ13492 652 aa24.44■■□□□ 1.5
UPK3B-203ENST00000394849 ALDH1L2Q3SY69 923 aa24.44■■□□□ 1.5
UPK3B-203ENST00000394849 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
UPK3B-203ENST00000394849 DDX4Q9NQI0 724 aaKnown RBP24.44■■□□□ 1.5
UPK3B-203ENST00000394849 MROH7-TTC4A0A0A0MT08 1334 aa24.43■■□□□ 1.5
UPK3B-203ENST00000394849 GPR75-ASB3A0A0A6YYF3 556 aa24.43■■□□□ 1.5
UPK3B-203ENST00000394849 E9PSI1 815 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms