RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 PCCAP05165 728 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 IQCB1Q15051 598 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 POSTNQ15063 836 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 PPP1R13BQ96KQ4 1090 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
UBE2D3-209ENST00000394804 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 CYP27B1O15528 508 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 STX17P56962 302 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 IFIT1BQ5T764 474 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 FMR1NBQ8N0W7 255 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 ZNF652Q9Y2D9 606 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 PXDNQ92626 1479 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 AP5Z1O43299 807 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 NGLY1Q96IV0 654 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 PALLDQ8WX93 1383 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 AKR1B15C9JRZ8 316 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 PDIA6Q15084 440 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 DZIP3Q86Y13 1208 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 ARMT1Q9H993 441 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 CABP5Q9NP86 173 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 JCADQ9P266 1359 aa13.3□□□□□ -0.28
UBE2D3-209ENST00000394804 MIGA1Q8NAN2 632 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 PDE8AO60658 829 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 PPP6R2O75170 966 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 CHGBP05060 677 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 KRT2P35908 639 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 PPP2R3AQ06190 1150 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 RRAGBQ5VZM2 374 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 APOA5Q6Q788 366 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 ZBTB38Q8NAP3 1195 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 LPIN2Q92539 896 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 EXOC5O00471 708 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 PDE6AP16499 860 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 KRBA2Q6ZNG9 492 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 CEP112Q8N8E3 955 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 LZTFL1Q9NQ48 299 aa13.29□□□□□ -0.28
UBE2D3-209ENST00000394804 CCDC194A0A1B0GVG4 234 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 DEF6Q9H4E7 631 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 FANCLQ9NW38 375 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 RMND1Q9NWS8 449 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 CTDSPL2Q05D32 466 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 SPECC1LQ69YQ0 1117 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 RBM43Q6ZSC3 357 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 CLIC6Q96NY7 704 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 PUS7LQ9H0K6 701 aaKnown RBP13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 KCNJ14Q9UNX9 436 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 KIF5BP33176 963 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 RFX5P48382 616 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 AKNAD1Q5T1N1 836 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 TOPAZ1Q8N9V7 1692 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 OSBPL5Q9H0X9 879 aaPredicted RBP13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 PCDHA5Q9Y5H7 936 aa13.28□□□□□ -0.28
UBE2D3-209ENST00000394804 MAP9Q49MG5 647 aa13.27□□□□□ -0.28
UBE2D3-209ENST00000394804 CNGA4Q8IV77 575 aa13.27□□□□□ -0.28
UBE2D3-209ENST00000394804 DHX40Q8IX18 779 aaKnown RBP13.27□□□□□ -0.28
UBE2D3-209ENST00000394804 TXLNBQ8N3L3 684 aa13.27□□□□□ -0.28
UBE2D3-209ENST00000394804 OVOS2A0A0G2JMS6 1433 aa13.27□□□□□ -0.28
UBE2D3-209ENST00000394804 MAGEB6P1A0A0J9YX57 407 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CTAGE9A4FU28 777 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 PATL2C9JE40 543 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CALM1P0DP23 149 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CALM2P0DP24 149 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CALM3P0DP25 149 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CTSWP56202 376 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 TRMT44Q8IYL2 757 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 IGSF22Q8N9C0 903 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CTAGE15A4D2H0 777 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CTAGE8P0CG41 777 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 AXDND1Q5T1B0 1012 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CTAGE6Q86UF2 777 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 CTAGE4Q8IX94 777 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 SPATA5Q8NB90 893 aa13.27□□□□□ -0.29
UBE2D3-209ENST00000394804 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 MCM3P25205 808 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 ADD2P35612 726 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 UBA7P41226 1012 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 FOXO4P98177 505 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 ANKRD7Q92527 254 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 USP27XA6NNY8 438 aa13.26□□□□□ -0.29
UBE2D3-209ENST00000394804 CTIFO43310 598 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms