RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SMCR8Q8TEV9 937 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 EIF3CQ99613 913 aaKnown RBP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 AMOTL2Q9Y2J4 779 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 MCF2L2Q86YR7 1114 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 PAG1Q9NWQ8 432 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 PRR16Q569H4 304 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 EXOC8Q8IYI6 725 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 BBS5Q8N3I7 341 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 FANCAO15360 1455 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 GRM8O00222 908 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 HDXQ7Z353 690 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 IFT20Q8IY31 132 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 CNBD1Q8NA66 436 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 TRMT1Q9NXH9 659 aaKnown RBP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 IBTKQ9P2D0 1353 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-205ENST00000394768 ZBED4O75132 1171 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 LMNB1P20700 586 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 PPP1R21Q6ZMI0 780 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 CCDC25Q86WR0 208 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 NBPF1Q3BBV0 1214 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 TBC1D22AQ8WUA7 517 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 MAP3K7O43318 606 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 NBPF3Q9H094 633 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 KIAA0586Q9BVV6 1533 aa8.27□□□□□ -1.09
SYNE2-205ENST00000394768 SPTLC2O15270 562 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 FOXO3O43524 673 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 INPP1P49441 399 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 CDR2Q01850 454 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 FCHSD1Q86WN1 690 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 SLC8A2Q9UPR5 921 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 FAN1Q9Y2M0 1017 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 KDM3AQ9Y4C1 1321 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 CFAP65Q6ZU64 1925 aaKnown RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 RBBP5Q15291 538 aaKnown RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 TAF11Q15544 211 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 ARHGEF35A5YM69 484 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 PRPF6O94906 941 aaKnown RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 SLC9C2Q5TAH2 1124 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 IL2RBP14784 551 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 KLHL40Q2TBA0 621 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 DPY19L2Q6NUT2 758 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 PPP1R2P3Q6NXS1 205 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 A0A1B0GVL5 298 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 PALM2Q8IXS6 379 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 UBLCP1Q8WVY7 318 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 TRIM56Q9BRZ2 755 aaKnown RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 IRX3P78415 501 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 GRK7Q8WTQ7 553 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 ELP1O95163 1332 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 S100BP04271 92 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 PDCD2Q16342 344 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 PROCA1Q8NCQ7 364 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 PYGLP06737 847 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 POTEDQ86YR6 584 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 NT5C3AQ9H0P0 336 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 N4BP1O75113 896 aaKnown RBP8.26□□□□□ -1.09
SYNE2-205ENST00000394768 SKILP12757 684 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 DCAF15Q66K64 600 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 CSADQ9Y600 493 aa8.26□□□□□ -1.09
SYNE2-205ENST00000394768 TRIM37O94972 964 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 SRGAP2BP0DMP2 458 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 ARHGAP25P42331 645 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 UAP1Q16222 522 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 PLB1Q6P1J6 1458 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 NESP48681 1621 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 RAB17Q9H0T7 212 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 XPOTO43592 962 aaKnown RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TMOD1P28289 359 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 RAPGEF1Q13905 1077 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TTF2Q9UNY4 1162 aaKnown RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 ORC6Q9Y5N6 252 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TNFAIP3P21580 790 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 PTPREP23469 700 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 YARSP54577 528 aaKnown RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 RAB3GAP1Q15042 981 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TTC22Q5TAA0 569 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 CYP26C1Q6V0L0 522 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 SEPT14Q6ZU15 432 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 FLAD1Q8NFF5 587 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 FAM193BQ96PV7 902 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 HEXIM1O94992 359 aaKnown RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TERF1P54274 439 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 EDEM3Q9BZQ6 932 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 PDE6AP16499 860 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 TRIM50Q86XT4 487 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 SSH1Q8WYL5 1049 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 EIF2AQ9BY44 585 aaKnown RBP8.25□□□□□ -1.09
SYNE2-205ENST00000394768 RAPGEF3O95398 923 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 CAPN2P17655 700 aa8.25□□□□□ -1.09
SYNE2-205ENST00000394768 SLC9C1Q4G0N8 1177 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms