RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 KRT23Q9C075 422 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 CNNM2Q9H8M5 875 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 ADAMTS2O95450 1211 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 CHRNDQ07001 517 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 GLIPR1L2Q4G1C9 344 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 ISM2Q6H9L7 571 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 MAP3K14Q99558 947 aa19.28■□□□□ 0.68
PRDM5-202ENST00000394435 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.28■□□□□ 0.68
PRDM5-202ENST00000394435 IQSEC3Q9UPP2 1182 aaPredicted RBP19.28■□□□□ 0.68
PRDM5-202ENST00000394435 SHC4Q6S5L8 630 aa19.27■□□□□ 0.68
PRDM5-202ENST00000394435 LRP2BPQ9P2M1 347 aa19.27■□□□□ 0.68
PRDM5-202ENST00000394435 PPP6R2O75170 966 aa19.27■□□□□ 0.67
PRDM5-202ENST00000394435 U2AF2P26368 475 aaKnown RBP eCLIP19.27■□□□□ 0.67
PRDM5-202ENST00000394435 SYKP43405 635 aa19.27■□□□□ 0.67
PRDM5-202ENST00000394435 TPD52L1Q16890 204 aaPredicted RBP19.27■□□□□ 0.67
PRDM5-202ENST00000394435 CLIC6Q96NY7 704 aa19.27■□□□□ 0.67
PRDM5-202ENST00000394435 ARID3AQ99856 593 aa19.27■□□□□ 0.67
PRDM5-202ENST00000394435 NACAP1Q9BZK3 213 aa19.27■□□□□ 0.67
PRDM5-202ENST00000394435 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.67
PRDM5-202ENST00000394435 TIAM2Q8IVF5 1701 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 FMNL1O95466 1100 aaPredicted RBP19.26■□□□□ 0.67
PRDM5-202ENST00000394435 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
PRDM5-202ENST00000394435 MTERF4Q7Z6M4 381 aaKnown RBP19.26■□□□□ 0.67
PRDM5-202ENST00000394435 MARCH10Q8NA82 808 aaPredicted RBP19.26■□□□□ 0.67
PRDM5-202ENST00000394435 BPIFA3Q9BQP9 254 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 SPATA31A1Q5TZJ5 1347 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 PNPLA7Q6ZV29 1317 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 TNNT1P13805 278 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 GNAT2P19087 354 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 GUCY1A2P33402 732 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 NBPF11Q86T75 865 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 STAG1Q8WVM7 1258 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 HPSEQ9Y251 543 aa19.26■□□□□ 0.67
PRDM5-202ENST00000394435 MYH14Q7Z406 1995 aaKnown RBP19.26■□□□□ 0.67
PRDM5-202ENST00000394435 COL4A1P02462 1669 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 NEMFO60524 1076 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 JMYQ8N9B5 988 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 BCL2L12Q9HB09 334 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 SKILP12757 684 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 WTAPQ15007 396 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
PRDM5-202ENST00000394435 CDCA7Q9BWT1 371 aaPredicted RBP19.25■□□□□ 0.67
PRDM5-202ENST00000394435 COL22A1Q8NFW1 1626 aaPredicted RBP19.24■□□□□ 0.67
PRDM5-202ENST00000394435 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 IFNAR1P17181 557 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 CYP7A1P22680 504 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 ADGRA1Q86SQ6 560 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 CCDC82Q8N4S0 544 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 RTL9Q8NET4 1388 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 USP27XA6NNY8 438 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 SMC2O95347 1197 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 CCZ1BP86790 482 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 CCZ1P86791 482 aaPredicted RBP19.24■□□□□ 0.67
PRDM5-202ENST00000394435 RTN1Q16799 776 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 CMTR1Q8N1G2 835 aaKnown RBP19.24■□□□□ 0.67
PRDM5-202ENST00000394435 XPO4Q9C0E2 1151 aaKnown RBP19.24■□□□□ 0.67
PRDM5-202ENST00000394435 IFNKQ9P0W0 207 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 KCNJ14Q9UNX9 436 aa19.24■□□□□ 0.67
PRDM5-202ENST00000394435 WTIPA6NIX2 430 aaPredicted RBP19.23■□□□□ 0.67
PRDM5-202ENST00000394435 BTBD18B2RXH4 712 aa19.23■□□□□ 0.67
PRDM5-202ENST00000394435 RESP18Q5W5W9 173 aa19.23■□□□□ 0.67
PRDM5-202ENST00000394435 ABCF2Q9UG63 623 aa19.23■□□□□ 0.67
PRDM5-202ENST00000394435 PNOCQ13519 176 aa19.23■□□□□ 0.67
PRDM5-202ENST00000394435 NCAPHQ15003 741 aa19.23■□□□□ 0.67
PRDM5-202ENST00000394435 SART3Q15020 963 aaKnown RBP19.23■□□□□ 0.67
PRDM5-202ENST00000394435 SDR42E1Q8WUS8 393 aa19.23■□□□□ 0.67
PRDM5-202ENST00000394435 RREB1Q92766 1687 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 GYG1P46976 350 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 PPARAQ07869 468 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 WASF1Q92558 559 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 ERICH2A1L162 156 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 MINDY4BA8MYZ0 360 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 CUTAO60888 179 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 MMP1P03956 469 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 NOSTRINQ8IVI9 506 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 NUP133Q8WUM0 1156 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 RAI14Q9P0K7 980 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 TUBE1Q9UJT0 475 aa19.22■□□□□ 0.67
PRDM5-202ENST00000394435 NID2Q14112 1375 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 LAMB2P55268 1798 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 BCL9LQ86UU0 1499 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 FAM237AA0A1B0GTK4 181 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 SMTNL1A8MU46 457 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 SMIM22K7EJ46 135 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 TPM4P67936 248 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 C3orf67Q6ZVT6 689 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 DIS3L2Q8IYB7 885 aaKnown RBP19.21■□□□□ 0.67
PRDM5-202ENST00000394435 TRIM22Q8IYM9 498 aa19.21■□□□□ 0.67
PRDM5-202ENST00000394435 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.21■□□□□ 0.67
PRDM5-202ENST00000394435 THRAP3Q9Y2W1 955 aaKnown RBP19.21■□□□□ 0.67
PRDM5-202ENST00000394435 LONRF3Q496Y0 759 aa19.2■□□□□ 0.66
PRDM5-202ENST00000394435 ERFEQ4G0M1 354 aa19.2■□□□□ 0.66
PRDM5-202ENST00000394435 SPECC1Q5M775 1068 aa19.2■□□□□ 0.66
PRDM5-202ENST00000394435 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
PRDM5-202ENST00000394435 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
PRDM5-202ENST00000394435 LMOD1P29536 600 aaPredicted RBP19.2■□□□□ 0.66
PRDM5-202ENST00000394435 TOB1P50616 345 aaPredicted RBP19.2■□□□□ 0.66
PRDM5-202ENST00000394435 GSDMDP57764 484 aa19.2■□□□□ 0.66
PRDM5-202ENST00000394435 SAFBQ15424 915 aaKnown RBP eCLIP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms