RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ABCF2Q9UG63 623 aa21.64■■□□□ 1.05
SNRPA1-202ENST00000394082 MROH7-TTC4A0A0A0MT08 1334 aa21.63■■□□□ 1.05
SNRPA1-202ENST00000394082 GPR75-ASB3A0A0A6YYF3 556 aa21.63■■□□□ 1.05
SNRPA1-202ENST00000394082 TFCP2Q12800 502 aa21.63■■□□□ 1.05
SNRPA1-202ENST00000394082 PICK1Q9NRD5 415 aa21.63■■□□□ 1.05
SNRPA1-202ENST00000394082 SRRDQ9UH36 339 aa21.63■■□□□ 1.05
SNRPA1-202ENST00000394082 SLC45A1Q9Y2W3 748 aa21.63■■□□□ 1.05
SNRPA1-202ENST00000394082 A0A0G2JLL6 359 aaPredicted RBP21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 TBC1D12O60347 775 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 CTNND1O60716 968 aaKnown RBP21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 TRIM27P14373 513 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 PTPRAP18433 802 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 PSMC4P43686 418 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 GPAT2Q6NUI2 795 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 SH3BP5LQ7L8J4 393 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 PRRT2Q7Z6L0 340 aaPredicted RBP21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 CPA4Q9UI42 421 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 AFG3L2Q9Y4W6 797 aa21.62■■□□□ 1.05
SNRPA1-202ENST00000394082 GNAI2P04899 355 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 BCRP11274 1271 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 BTDP43251 543 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 SLC4A8Q2Y0W8 1093 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 ATF7IPQ6VMQ6 1270 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 TRIM47Q96LD4 638 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 ZHX2Q9Y6X8 837 aa21.61■■□□□ 1.05
SNRPA1-202ENST00000394082 ZSWIM8A7E2V4 1837 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 COL2A1P02458 1487 aaPredicted RBP21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 DDTLA6NHG4 134 aaPredicted RBP21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 CTGFP29279 349 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 ARID4AP29374 1257 aaPredicted RBP21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 RHBDL3P58872 404 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 GSTO1P78417 241 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 MECOMQ03112 1051 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 ZSCAN29Q8IWY8 852 aaPredicted RBP21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 SH3TC2Q8TF17 1288 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 DDX4Q9NQI0 724 aaKnown RBP21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 HMG20BQ9P0W2 317 aa21.6■■□□□ 1.05
SNRPA1-202ENST00000394082 LDHCP07864 332 aa21.59■■□□□ 1.05
SNRPA1-202ENST00000394082 OSBPP22059 807 aa21.59■■□□□ 1.05
SNRPA1-202ENST00000394082 SPATA5Q8NB90 893 aa21.59■■□□□ 1.05
SNRPA1-202ENST00000394082 ZNF384Q8TF68 577 aa21.59■■□□□ 1.05
SNRPA1-202ENST00000394082 IGSF3O75054 1194 aa21.58■■□□□ 1.05
SNRPA1-202ENST00000394082 FMNL1O95466 1100 aaPredicted RBP21.58■■□□□ 1.05
SNRPA1-202ENST00000394082 NSUN4Q96CB9 384 aaKnown RBP21.58■■□□□ 1.05
SNRPA1-202ENST00000394082 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.05
SNRPA1-202ENST00000394082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.58■■□□□ 1.05
SNRPA1-202ENST00000394082 NKX2-3Q8TAU0 364 aa21.57■■□□□ 1.04
SNRPA1-202ENST00000394082 GPR108Q9NPR9 543 aa21.57■■□□□ 1.04
SNRPA1-202ENST00000394082 DOCK1Q14185 1865 aa21.57■■□□□ 1.04
SNRPA1-202ENST00000394082 UQCRFS1P1P0C7P4 283 aa21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 GRK4P32298 578 aa21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 FCGRTP55899 365 aa21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 G3BP1Q13283 466 aaKnown RBP eCLIP21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 HABP4Q5JVS0 413 aaKnown RBP21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 GORABQ5T7V8 394 aa21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 RAET1EQ8TD07 263 aa21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 TBC1D2Q9BYX2 928 aa21.56■■□□□ 1.04
SNRPA1-202ENST00000394082 MYPNQ86TC9 1320 aa21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 PHIPQ8WWQ0 1821 aa21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 PTPRFP10586 1907 aa21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 PNMA6EA0A0J9YXQ4 647 aa21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 CYP2C8P10632 490 aa21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 PICALMQ13492 652 aa21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 OSBPL5Q9H0X9 879 aaPredicted RBP21.55■■□□□ 1.04
SNRPA1-202ENST00000394082 BCAR3O75815 825 aa21.54■■□□□ 1.04
SNRPA1-202ENST00000394082 CAPN2P17655 700 aa21.54■■□□□ 1.04
SNRPA1-202ENST00000394082 GJB1P08034 283 aa21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 MCAMP43121 646 aa21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 POLA2Q14181 598 aa21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 SLAIN1Q8ND83 568 aa21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 FRAT1Q92837 279 aaPredicted RBP21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 AGTPBP1Q9UPW5 1226 aa21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 MGAMO43451 1857 aa21.53■■□□□ 1.04
SNRPA1-202ENST00000394082 GJA8P48165 433 aa21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 MTFR1Q15390 333 aa21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 ZKSCAN2Q63HK3 967 aa21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 PI16Q6UXB8 463 aa21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 GADL1Q6ZQY3 521 aa21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 PROCA1Q8NCQ7 364 aaPredicted RBP21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 ZNF512BQ96KM6 892 aaPredicted RBP21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 HERC5Q9UII4 1024 aaKnown RBP21.52■■□□□ 1.04
SNRPA1-202ENST00000394082 UBXN2AP68543 259 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 PRKCZQ05513 592 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 IRF5Q13568 498 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 TBC1D9Q6ZT07 1266 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 SSH3Q8TE77 659 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 PXYLP1Q8TE99 480 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 SHISA4Q96DD7 197 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 DHX36Q9H2U1 1008 aaKnown RBP21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 RAI14Q9P0K7 980 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 LRP2BPQ9P2M1 347 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 PNMA3Q9UL41 463 aa21.51■■□□□ 1.03
SNRPA1-202ENST00000394082 TRIM75PA6NK02 468 aa21.5■■□□□ 1.03
SNRPA1-202ENST00000394082 MYCP01106 439 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-202ENST00000394082 PLCG2P16885 1265 aa21.5■■□□□ 1.03
SNRPA1-202ENST00000394082 UBE2Q1Q7Z7E8 422 aa21.5■■□□□ 1.03
SNRPA1-202ENST00000394082 SMCR8Q8TEV9 937 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-202ENST00000394082 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms