RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 CNNM4Q6P4Q7 775 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 JAKMIP2Q96AA8 810 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 XAGE2Q96GT9 111 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 BLMP54132 1417 aaPredicted RBP14.71□□□□□ -0.05
LCA5-202ENST00000392959 SETDB1Q15047 1291 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 YTHDC2Q9H6S0 1430 aaKnown RBP14.71□□□□□ -0.05
LCA5-202ENST00000392959 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
LCA5-202ENST00000392959 HPDP32754 393 aaPredicted RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 TTC38Q5R3I4 469 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 UTP14CQ5TAP6 766 aaKnown RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 SUCLG2Q96I99 432 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 NUP58Q9BVL2 599 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 ZNF518AQ6AHZ1 1483 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 A6NNZ2 444 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 TUBB8Q3ZCM7 444 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 OGFOD1Q8N543 542 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 NAP1L3Q99457 506 aaPredicted RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 NAP1L4Q99733 375 aaKnown RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 ANKRD2Q9GZV1 360 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 DENND2AQ9ULE3 1009 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 GOLGA6CA6NDK9 693 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 GOLGA6DP0CG33 693 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 DDB1Q16531 1140 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 CCDC63Q8NA47 563 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 MPHOSPH6Q99547 160 aaKnown RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 ARMT1Q9H993 441 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 GOLGA6AQ9NYA3 693 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 GSPT1P15170 499 aaKnown RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 POSTNQ15063 836 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 ME3Q16798 604 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 SEL1L2Q5TEA6 688 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 XPO4Q9C0E2 1151 aaKnown RBP14.7□□□□□ -0.06
LCA5-202ENST00000392959 BCL2L12Q9HB09 334 aa14.7□□□□□ -0.06
LCA5-202ENST00000392959 ZNF500O60304 480 aaPredicted RBP14.69□□□□□ -0.06
LCA5-202ENST00000392959 ITGA6P23229 1130 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 MTX1Q13505 466 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 TTC6Q86TZ1 520 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 SECISBP2LQ93073 1101 aaKnown RBP14.69□□□□□ -0.06
LCA5-202ENST00000392959 NKIRAS1Q9NYS0 192 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 STIM2Q9P246 746 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 MAGEA1P43355 309 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 GBP6Q6ZN66 633 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 PHKBQ93100 1093 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 PUM3Q15397 648 aaKnown RBP14.69□□□□□ -0.06
LCA5-202ENST00000392959 TAB2Q9NYJ8 693 aa14.69□□□□□ -0.06
LCA5-202ENST00000392959 CETN3O15182 167 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 PRDM1O75626 825 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 EPB41P11171 864 aaKnown RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 PPP2R5BQ15173 497 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 NOX5Q96PH1 765 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 JAG2Q9Y219 1238 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 NDUFB9Q9Y6M9 179 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 SHANK2Q9UPX8 1470 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 TRPM2O94759 1503 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 VIMP08670 466 aaKnown RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 PLS1Q14651 629 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 ZNF594Q96JF6 807 aaPredicted RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 HDAC9Q9UKV0 1011 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 FRMD4BQ9Y2L6 1034 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 CEP83Q9Y592 693 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 ACTN4O43707 911 aaKnown RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 ATP2A2P16615 1042 aaKnown RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 RNASE9P60153 205 aaKnown RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 MAP3K9P80192 1104 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 GCKRQ14397 625 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 IFT20Q8IY31 132 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 MYL10Q9BUA6 226 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 SH3TC1Q8TE82 1336 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 KIF24Q5T7B8 1368 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 EDC4Q6P2E9 1401 aaKnown RBP14.68□□□□□ -0.06
LCA5-202ENST00000392959 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 MYSM1Q5VVJ2 828 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 ADALQ6DHV7 355 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 LRRC45Q96CN5 670 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 LGR6Q9HBX8 967 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 ABCC4O15439 1325 aa14.68□□□□□ -0.06
LCA5-202ENST00000392959 SPOPO43791 374 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 LACTBP83111 547 aaPredicted RBP14.67□□□□□ -0.06
LCA5-202ENST00000392959 SLF1Q9BQI6 1058 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 KIAA1468Q9P260 1216 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 ZMYM3Q14202 1370 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 GOLGA6BA6NDN3 693 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 TNFAIP3P21580 790 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 TSC1Q92574 1164 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 ATP5JP18859 108 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 INPP5BP32019 993 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 KIAA1524Q8TCG1 905 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 PSMD1Q99460 953 aa14.67□□□□□ -0.06
LCA5-202ENST00000392959 TXKP42681 527 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 AKNAD1Q5T1N1 836 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 TRMT44Q8IYL2 757 aaKnown RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 SSH3Q8TE77 659 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 LONRF3Q496Y0 759 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 INTS8Q75QN2 995 aaKnown RBP14.66□□□□□ -0.06
LCA5-202ENST00000392959 TEX11Q8IYF3 940 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 MSANTD4Q8NCY6 345 aa14.66□□□□□ -0.06
LCA5-202ENST00000392959 DSCC1Q9BVC3 393 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms