RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 STAG1Q8WVM7 1258 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 TSC1Q92574 1164 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 NACAP1Q9BZK3 213 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 NRAPQ86VF7 1730 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 PRKAB2O43741 272 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 FMNL1O95466 1100 aaPredicted RBP14.24□□□□□ -0.13
RFC5-201ENST00000392542 TDO2P48775 406 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 SIK1P57059 783 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 DDB1Q16531 1140 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 MAP3K14Q99558 947 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
RFC5-201ENST00000392542 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 SLC4A4Q9Y6R1 1079 aa14.24□□□□□ -0.13
RFC5-201ENST00000392542 A0A0G2JS52 829 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 IFNAR1P17181 557 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 SYKP43405 635 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 ITPK1Q13572 414 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 ARID5BQ14865 1188 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 ZNF710Q8N1W2 664 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 WASF1Q92558 559 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 C16orf45Q96MC5 204 aaPredicted RBP14.23□□□□□ -0.13
RFC5-201ENST00000392542 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
RFC5-201ENST00000392542 THRAP3Q9Y2W1 955 aaKnown RBP14.23□□□□□ -0.13
RFC5-201ENST00000392542 SPATA31A1Q5TZJ5 1347 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 SHC4Q6S5L8 630 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 ACSBG1Q96GR2 724 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 BCL9LQ86UU0 1499 aa14.23□□□□□ -0.13
RFC5-201ENST00000392542 SMTNL1A8MU46 457 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 BIN1O00499 593 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 TNNT1P13805 278 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 CHRNDQ07001 517 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 TPD52L1Q16890 204 aaPredicted RBP14.22□□□□□ -0.13
RFC5-201ENST00000392542 FILIP1Q7Z7B0 1213 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 CUTAO60888 179 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 GSDMDP57764 484 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 TPM4P67936 248 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 CCZ1BP86790 482 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 CCZ1P86791 482 aaPredicted RBP14.22□□□□□ -0.13
RFC5-201ENST00000392542 WTAPQ15007 396 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
RFC5-201ENST00000392542 RRP12Q5JTH9 1297 aaKnown RBP14.22□□□□□ -0.13
RFC5-201ENST00000392542 RESP18Q5W5W9 173 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 NBPF11Q86T75 865 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
RFC5-201ENST00000392542 IMPACTQ9P2X3 320 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 TUBE1Q9UJT0 475 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 A0A1B0GUL6 1792 aa14.22□□□□□ -0.13
RFC5-201ENST00000392542 UBE2Q2LH0YL09 131 aa14.21□□□□□ -0.13
RFC5-201ENST00000392542 RTN1Q16799 776 aa14.21□□□□□ -0.13
RFC5-201ENST00000392542 OSBPL5Q9H0X9 879 aaPredicted RBP14.21□□□□□ -0.13
RFC5-201ENST00000392542 RNF41Q9H4P4 317 aaPredicted RBP14.21□□□□□ -0.13
RFC5-201ENST00000392542 LRP2BPQ9P2M1 347 aa14.21□□□□□ -0.13
RFC5-201ENST00000392542 CTIFO43310 598 aaKnown RBP14.21□□□□□ -0.14
RFC5-201ENST00000392542 SKILP12757 684 aa14.21□□□□□ -0.14
RFC5-201ENST00000392542 NCAPHQ15003 741 aa14.21□□□□□ -0.14
RFC5-201ENST00000392542 MARCH10Q8NA82 808 aaPredicted RBP14.21□□□□□ -0.14
RFC5-201ENST00000392542 MIGA1Q8NAN2 632 aa14.21□□□□□ -0.14
RFC5-201ENST00000392542 TOMM22Q9NS69 142 aa14.21□□□□□ -0.14
RFC5-201ENST00000392542 COL4A1P02462 1669 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 ERICH2A1L162 156 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 IKBKBO14920 756 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 RCAN1P53805 252 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 NOSTRINQ8IVI9 506 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 TRIM22Q8IYM9 498 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 CDC5LQ99459 802 aaKnown RBP14.2□□□□□ -0.14
RFC5-201ENST00000392542 ZKSCAN3Q9BRR0 538 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 XPO4Q9C0E2 1151 aaKnown RBP14.2□□□□□ -0.14
RFC5-201ENST00000392542 MMP1P03956 469 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 CYP7A1P22680 504 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 GUCY1A2P33402 732 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 PPARAQ07869 468 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 SAFBQ15424 915 aaKnown RBP eCLIP14.2□□□□□ -0.14
RFC5-201ENST00000392542 CLIC6Q96NY7 704 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 IFNKQ9P0W0 207 aa14.2□□□□□ -0.14
RFC5-201ENST00000392542 COL5A3P25940 1745 aaPredicted RBP14.19□□□□□ -0.14
RFC5-201ENST00000392542 ZNF804BA4D1E1 1349 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 SMC2O95347 1197 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 PAXBP1Q9Y5B6 917 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 CCDC196A0A1B0GTZ2 297 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 DEXIO95424 95 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 DIS3L2Q8IYB7 885 aaKnown RBP14.19□□□□□ -0.14
RFC5-201ENST00000392542 KCND1Q9NSA2 647 aa14.19□□□□□ -0.14
RFC5-201ENST00000392542 CASZ1Q86V15 1759 aa14.18□□□□□ -0.14
RFC5-201ENST00000392542 BTBD18B2RXH4 712 aa14.18□□□□□ -0.14
RFC5-201ENST00000392542 ADGRA1Q86SQ6 560 aa14.18□□□□□ -0.14
RFC5-201ENST00000392542 ZNF654Q8IZM8 581 aa14.18□□□□□ -0.14
RFC5-201ENST00000392542 CRACR2BQ8N4Y2 399 aaPredicted RBP14.18□□□□□ -0.14
RFC5-201ENST00000392542 KRI1Q8N9T8 703 aaKnown RBP14.18□□□□□ -0.14
RFC5-201ENST00000392542 CCDC150Q8NCX0 1101 aa14.18□□□□□ -0.14
RFC5-201ENST00000392542 FOXP1Q9H334 677 aaPredicted RBP14.18□□□□□ -0.14
RFC5-201ENST00000392542 ANAPC4Q9UJX5 808 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms