RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 HIP1RO75146 1068 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 RASA3Q14644 834 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 HHATQ5VTY9 493 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 RTN1Q16799 776 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 LRRC2Q9BYS8 371 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 CCDC68Q9H2F9 335 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 RNF40O75150 1001 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 ATP6V1AP38606 617 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 HSP90AA4PQ58FG1 418 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 DENND2CQ68D51 928 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 HACE1Q8IYU2 909 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 EXOC7Q9UPT5 735 aa16.38■□□□□ 0.21
CCDC50-201ENST00000392455 LMNB2Q03252 620 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 TEKT2Q9UIF3 430 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 IFT81Q8WYA0 676 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 COPG1Q9Y678 874 aaKnown RBP16.37■□□□□ 0.21
CCDC50-201ENST00000392455 PPFIA4O75335 1185 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 CERS3Q8IU89 383 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 F8W8V4 182 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 YWHAEP62258 255 aaKnown RBP16.37■□□□□ 0.21
CCDC50-201ENST00000392455 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 MIS12Q9H081 205 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 RTEL1Q9NZ71 1219 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 AK9Q5TCS8 1911 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 ASIC1P78348 528 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 TMEM110-MUSTN1A8MSY1 372 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 CHRNA2Q15822 529 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 ZNF569Q5MCW4 686 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 IQSEC3Q9UPP2 1182 aaPredicted RBP16.37■□□□□ 0.21
CCDC50-201ENST00000392455 NOS1P29475 1434 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 TTC4O95801 387 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 UBXN1Q04323 297 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 FBXO31Q5XUX0 539 aaPredicted RBP16.37■□□□□ 0.21
CCDC50-201ENST00000392455 GIMAP6Q6P9H5 292 aa16.37■□□□□ 0.21
CCDC50-201ENST00000392455 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
CCDC50-201ENST00000392455 NOLC1Q14978 699 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC50-201ENST00000392455 DPH6Q7L8W6 267 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 FNBP4Q8N3X1 1017 aaPredicted RBP16.36■□□□□ 0.21
CCDC50-201ENST00000392455 TTF2Q9UNY4 1162 aaKnown RBP16.36■□□□□ 0.21
CCDC50-201ENST00000392455 MAP2K2P36507 400 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 ANKRD20A4Q4UJ75 823 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 ANKRD20A8PQ5CZ79 823 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 ANKRD20A2Q5SQ80 823 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 ANKRD20A1Q5TYW2 823 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 PRPF38AQ8NAV1 312 aaKnown RBP16.36■□□□□ 0.21
CCDC50-201ENST00000392455 MRPS27Q92552 414 aaKnown RBP16.36■□□□□ 0.21
CCDC50-201ENST00000392455 CCDC138Q96M89 665 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 RFX1P22670 979 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 SPECC1L-ADORA2AF8WAN1 911 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 ANXA1P04083 346 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 PSMD6Q15008 389 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 ADGRF5Q8IZF2 1346 aa16.36■□□□□ 0.21
CCDC50-201ENST00000392455 MYO10Q9HD67 2058 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 P4HA1P13674 534 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 ZFP91Q96JP5 570 aaPredicted RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 RNASELQ05823 741 aaKnown RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 KIFC3Q9BVG8 833 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 CEBPAP49715 358 aaPredicted RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 GABPB1Q06547 395 aaPredicted RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 C8orf74Q6P047 294 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 EFHD1Q9BUP0 239 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 ZSCAN23Q3MJ62 389 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 TRIM4Q9C037 500 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 TXNDC9O14530 226 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 NAPAP54920 295 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 LEO1Q8WVC0 666 aaPredicted RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 NSD2O96028 1365 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 UAP1Q16222 522 aaPredicted RBP16.35■□□□□ 0.21
CCDC50-201ENST00000392455 RBSNQ9H1K0 784 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
CCDC50-201ENST00000392455 ANO6Q4KMQ2 910 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 SMAP1Q8IYB5 467 aaPredicted RBP16.34■□□□□ 0.21
CCDC50-201ENST00000392455 SH2D4AQ9H788 454 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 GJC1P36383 396 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 PPP1R9AQ9ULJ8 1098 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 SCINQ9Y6U3 715 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 SPOPO43791 374 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
CCDC50-201ENST00000392455 PAK2Q13177 524 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 CXorf38Q8TB03 319 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 PTGS1P23219 599 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 Q6ZUG5 572 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
CCDC50-201ENST00000392455 SATB2Q9UPW6 733 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms