RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 WNK4Q96J92 1243 aa15.43■□□□□ 0.06
GGPS1-203ENST00000391855 CRBNQ96SW2 442 aa15.43■□□□□ 0.06
GGPS1-203ENST00000391855 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
GGPS1-203ENST00000391855 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
GGPS1-203ENST00000391855 IDH1O75874 414 aaKnown RBP15.43■□□□□ 0.06
GGPS1-203ENST00000391855 PPP4CP60510 307 aa15.43■□□□□ 0.06
GGPS1-203ENST00000391855 MAP3K12Q12852 859 aa15.43■□□□□ 0.06
GGPS1-203ENST00000391855 CLMNQ96JQ2 1002 aa15.43■□□□□ 0.06
GGPS1-203ENST00000391855 ATRNL1Q5VV63 1379 aa15.42■□□□□ 0.06
GGPS1-203ENST00000391855 TM4SF4P48230 202 aa15.42■□□□□ 0.06
GGPS1-203ENST00000391855 LBX1P52954 281 aa15.42■□□□□ 0.06
GGPS1-203ENST00000391855 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.42■□□□□ 0.06
GGPS1-203ENST00000391855 GPATCH3Q96I76 525 aa15.42■□□□□ 0.06
GGPS1-203ENST00000391855 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
GGPS1-203ENST00000391855 PCDHB15Q9Y5E8 787 aa15.42■□□□□ 0.06
GGPS1-203ENST00000391855 ATP5JP18859 108 aa15.41■□□□□ 0.06
GGPS1-203ENST00000391855 PICALMQ13492 652 aa15.41■□□□□ 0.06
GGPS1-203ENST00000391855 VGLL4Q14135 290 aa15.41■□□□□ 0.06
GGPS1-203ENST00000391855 ZSCAN29Q8IWY8 852 aaPredicted RBP15.41■□□□□ 0.06
GGPS1-203ENST00000391855 TEX11Q8IYF3 940 aa15.41■□□□□ 0.06
GGPS1-203ENST00000391855 ELP3Q9H9T3 547 aa15.41■□□□□ 0.06
GGPS1-203ENST00000391855 AK9Q5TCS8 1911 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 SPDYE5A6NIY4 337 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 ALDH1A1P00352 501 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 CYP7A1P22680 504 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 OPTNQ96CV9 577 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 OSBPL5Q9H0X9 879 aaPredicted RBP15.4■□□□□ 0.06
GGPS1-203ENST00000391855 DDX4Q9NQI0 724 aaKnown RBP15.4■□□□□ 0.06
GGPS1-203ENST00000391855 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 AATFQ9NY61 560 aaKnown RBP eCLIP15.4■□□□□ 0.06
GGPS1-203ENST00000391855 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
GGPS1-203ENST00000391855 MKRN3Q13064 507 aaKnown RBP15.39■□□□□ 0.05
GGPS1-203ENST00000391855 COL13A1Q5TAT6 717 aaPredicted RBP15.39■□□□□ 0.05
GGPS1-203ENST00000391855 ERO1BQ86YB8 467 aa15.39■□□□□ 0.05
GGPS1-203ENST00000391855 MAGEB6Q8N7X4 407 aa15.39■□□□□ 0.05
GGPS1-203ENST00000391855 DNAJC2Q99543 621 aaKnown RBP15.39■□□□□ 0.05
GGPS1-203ENST00000391855 ANTXR1Q9H6X2 564 aa15.39■□□□□ 0.05
GGPS1-203ENST00000391855 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
GGPS1-203ENST00000391855 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.05
GGPS1-203ENST00000391855 GOLIM4O00461 696 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 TRPA1O75762 1119 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 MAP3K10Q02779 954 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 HDAC1Q13547 482 aaPredicted RBP15.38■□□□□ 0.05
GGPS1-203ENST00000391855 NOL9Q5SY16 702 aaKnown RBP15.38■□□□□ 0.05
GGPS1-203ENST00000391855 OTUD7BQ6GQQ9 843 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 MIGA2Q7L4E1 593 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 ZFPM1Q8IX07 1006 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
GGPS1-203ENST00000391855 HAUS7Q99871 368 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 CFHR5Q9BXR6 569 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 DHX36Q9H2U1 1008 aaKnown RBP15.38■□□□□ 0.05
GGPS1-203ENST00000391855 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
GGPS1-203ENST00000391855 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 DDTLA6NHG4 134 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 SMARCA5O60264 1052 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 TBC1D12O60347 775 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 PPATQ06203 517 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 NOM1Q5C9Z4 860 aaKnown RBP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 SH3BP5LQ7L8J4 393 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 ADGRA1Q86SQ6 560 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 BOLA2Q9H3K6 86 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 PAG1Q9NWQ8 432 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
GGPS1-203ENST00000391855 FOCADQ5VW36 1801 aa15.37■□□□□ 0.05
GGPS1-203ENST00000391855 GJA5P36382 358 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 GTF2A2P52657 109 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 PPIL2Q13356 520 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 TNS4Q8IZW8 715 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 ZKSCAN4Q969J2 545 aaPredicted RBP15.36■□□□□ 0.05
GGPS1-203ENST00000391855 OTUD5Q96G74 571 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 TSKSQ9UJT2 592 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 FLT1P17948 1338 aa15.36■□□□□ 0.05
GGPS1-203ENST00000391855 PDE6AP16499 860 aa15.35■□□□□ 0.05
GGPS1-203ENST00000391855 INPP5BP32019 993 aa15.35■□□□□ 0.05
GGPS1-203ENST00000391855 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
GGPS1-203ENST00000391855 ZSCAN25Q6NSZ9 544 aa15.35■□□□□ 0.05
GGPS1-203ENST00000391855 HERC5Q9UII4 1024 aaKnown RBP15.35■□□□□ 0.05
GGPS1-203ENST00000391855 TTC41PQ6P2S7 1318 aa15.35■□□□□ 0.05
GGPS1-203ENST00000391855 SCYL3Q8IZE3 742 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 MIGA1Q8NAN2 632 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 TGFBRAP1Q8WUH2 860 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 PI4KBQ9UBF8 816 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 CDK5RAP2Q96SN8 1893 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 CCL15-CCL14A0A0B4J2E2 113 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 MAGEB6P1A0A0J9YX57 407 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 PHF20L1A8MW92 1017 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 ERC2O15083 957 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 CTNND1O60716 968 aaKnown RBP15.34■□□□□ 0.05
GGPS1-203ENST00000391855 HLA-DOAP06340 250 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 CETPP11597 493 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 SNAPC2Q13487 334 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 CCL15Q16663 113 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 MAPKAPK5Q8IW41 473 aa15.34■□□□□ 0.05
GGPS1-203ENST00000391855 MS4A4AQ96JQ5 239 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms