RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 USP35Q9P2H5 1018 aa5.39□□□□□ -1.55
RNU6-278P-201ENST00000390945 STRIP2Q9ULQ0 834 aa5.39□□□□□ -1.55
RNU6-278P-201ENST00000390945 SPDYE3A6NKU9 549 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 PIK3R2O00459 728 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 SLFN14P0C7P3 912 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 COL8A1P27658 744 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 GIPRP48546 466 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 ZNF165P49910 485 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 RAC1P63000 192 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 CLCQ05315 142 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 DUOXA2Q1HG44 320 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 CWF19L2Q2TBE0 894 aaKnown RBP5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 UBASH3BQ8TF42 649 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 DHX38Q92620 1227 aaKnown RBP5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 LENG1Q96BZ8 264 aaPredicted RBP5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 CRIM1Q9NZV1 1036 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 PPP1R9AQ9ULJ8 1098 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 ZNRF3Q9ULT6 936 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 PCDHA4Q9UN74 947 aa5.38□□□□□ -1.55
RNU6-278P-201ENST00000390945 KLF4O43474 513 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 TIAF1O95411 115 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 NTF4P34130 210 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 ETFBP38117 255 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 ERVK-24P63145 666 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 TMEM201Q5SNT2 666 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 HP1BP3Q5SSJ5 553 aaPredicted RBP5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 Q6ZS46 218 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 HDXQ7Z353 690 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 PLPPR2Q96GM1 343 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 MRPL18Q9H0U6 180 aaKnown RBP5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 DISC1Q9NRI5 854 aa5.37□□□□□ -1.55
RNU6-278P-201ENST00000390945 F8W735 103 aaPredicted RBP5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 TMPRSS2O15393 492 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 LMNB1P20700 586 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 GRIK4Q16099 956 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 SOGA3Q5TF21 947 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 C12orf40Q86WS4 652 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 SRRTQ9BXP5 876 aaKnown RBP5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 USP26Q9BXU7 913 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 ZNF408Q9H9D4 720 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 HIF3AQ9Y2N7 669 aa5.36□□□□□ -1.55
RNU6-278P-201ENST00000390945 SHROOM4Q9ULL8 1493 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 MEIS3P2A8K0S8 358 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 FANCGO15287 622 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 IMPDH2P12268 514 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 GTF2F1P35269 517 aaKnown RBP eCLIP5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 CASP7P55210 303 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 SOX4Q06945 474 aaPredicted RBP5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 INTS3Q68E01 1043 aaKnown RBP5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 SHISA2Q6UWI4 295 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 FANCD2OSQ96PS1 177 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 RUSC1Q9BVN2 902 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 HIRIP3Q9BW71 556 aaPredicted RBP5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 WNT10AQ9GZT5 417 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 RNF208Q9H0X6 261 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 NOP53Q9NZM5 478 aaKnown RBP5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 PPT2Q9UMR5 302 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 PCDHB14Q9Y5E9 798 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 CORINQ9Y5Q5 1042 aa5.35□□□□□ -1.55
RNU6-278P-201ENST00000390945 SLC22A31A6NKX4 558 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 DCDC2CA8MYV0 355 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 HTR3BO95264 441 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 BPNT1O95861 308 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 SPATA31C1P0DKV0 1188 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 CAP2P40123 477 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 ID3Q02535 119 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 SERINC3Q13530 473 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 PDE3AQ14432 1141 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 WIPI1Q5MNZ9 446 aaPredicted RBP5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 ZBTB37Q5TC79 503 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 NBPF6Q5VWK0 638 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 CDCP2Q5VXM1 449 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 GK5Q6ZS86 529 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 DPH6Q7L8W6 267 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 FAM169BQ8N8A8 192 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 RNF214Q8ND24 703 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 NBPF4Q96M43 638 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 LNPKQ9C0E8 428 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 CYP4F12Q9HCS2 524 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 PPP1R1BQ9UD71 204 aaPredicted RBP5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 STK17AQ9UEE5 414 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 PRKAG3Q9UGI9 489 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 ADAM30Q9UKF2 790 aa5.34□□□□□ -1.55
RNU6-278P-201ENST00000390945 C9orf172C9J069 976 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 DNAJA2O60884 412 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 DRD2P14416 443 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 MCM4P33991 863 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 EIF6P56537 245 aaKnown RBP5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 LRRFIP1Q32MZ4 808 aaKnown RBP5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 PRRT3Q5FWE3 981 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 PPM1JQ5JR12 505 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 NUTM2GQ5VZR2 741 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 DIEXFQ68CQ4 756 aaKnown RBP5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 ACAD11Q709F0 780 aa5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 ALYREFQ86V81 257 aaKnown RBP5.33□□□□□ -1.56
RNU6-278P-201ENST00000390945 MCATQ8IVS2 390 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms