RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 NLGN1Q8N2Q7 840 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 C12orf50Q8NA57 414 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SIMC1Q8NDZ2 872 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 HELBQ8NG08 1087 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF483Q8TF39 744 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 MZB1Q8WU39 189 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 PPP1R13LQ8WUF5 828 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 WNT8BQ93098 351 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 WBP2Q969T9 261 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF503Q96F45 646 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ALPK1Q96QP1 1244 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SPATA25Q9BR10 227 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TMPRSS13Q9BYE2 586 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 RBSNQ9H1K0 784 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZBTB3Q9H5J0 574 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 RIOX1Q9H6W3 641 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 CD248Q9HCU0 757 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SEC31BQ9NQW1 1179 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SIRT5Q9NXA8 310 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TLR7Q9NYK1 1049 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 SLAMF8Q9P0V8 285 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ANKIB1Q9P2G1 1089 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNHIT2Q9UHR6 403 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 MBD1Q9UIS9 605 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 PLAGL2Q9UPG8 496 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 TRIM33Q9UPN9 1127 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 YBX2Q9Y2T7 364 aaKnown RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 KLF2Q9Y5W3 355 aaPredicted RBP0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF536O15090 1300 aa0.07□□□□□ -2.4
TRAJ28-201ENST00000390509 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 A0A1B0GVY2 172 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 OR14I1A6ND48 311 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 TMEM191CA6NGB0 347 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ZAR1LA6NP61 321 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 GNAT3A8MTJ3 354 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 H3BNC9 293 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 H3BRJ5 948 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 NTN3O00634 580 aaPredicted RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 U2SURPO15042 1029 aaKnown RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 RGL2O15211 777 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 FOXN1O15353 648 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 GAS8-AS1O95177 125 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 BMP15O95972 392 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LMNAP02545 664 aaKnown RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ADH5P11766 374 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 DRD2P14416 443 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 EPB42P16452 691 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 MAKP20794 623 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CDC27P30260 824 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 GJA5P36382 358 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 MCAMP43121 646 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ARL4DP49703 201 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CDR1P51861 262 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 HK2P52789 917 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 NLRP12P59046 1061 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 PIP4K2BP78356 416 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 E2F1Q01094 437 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 PLCB3Q01970 1234 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 FHL1Q13642 323 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CCINQ13939 588 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 SF3B4Q15427 424 aaKnown RBP eCLIP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 VPS72Q15906 364 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 E2F4Q16254 413 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 HS1BP3Q53T59 392 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 RBM26Q5T8P6 1007 aaKnown RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 STRIP1Q5VSL9 837 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 HIST2H2BCQ6DN03 193 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 BORAQ6PGQ7 559 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LRFN4Q6PJG9 635 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 SEZ6L2Q6UXD5 910 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF517Q6ZMY9 492 aaPredicted RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 HFE2Q6ZVN8 426 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 C1QL2Q7Z5L3 287 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 TTC6Q86TZ1 520 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CIR1Q86X95 450 aaPredicted RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 NPAS4Q8IUM7 802 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 SPACA3Q8IXA5 215 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 TMEFF1Q8IYR6 380 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ZNF295-AS1Q8N0V1 137 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LGI4Q8N135 537 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CARFQ8N187 725 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 PNMA1Q8ND90 353 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 RHPN1Q8TCX5 695 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LRRN4Q8WUT4 740 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 TSC1Q92574 1164 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 LARP4BQ92615 738 aaKnown RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 EDAQ92838 391 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 DDX11Q96FC9 970 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 PHOX2BQ99453 314 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 OCSTAMPQ9BR26 566 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 TTPALQ9BTX7 342 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 SSBP3Q9BWW4 388 aaPredicted RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 C1QTNF7Q9BXJ2 289 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 SLC29A3Q9BZD2 475 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 GSX2Q9BZM3 304 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 MMRN2Q9H8L6 949 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 CNTD2Q9H8S5 307 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 QTRT2Q9H974 415 aaKnown RBP0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 ETNK1Q9HBU6 452 aa0.06□□□□□ -2.4
TRAJ28-201ENST00000390509 METTL14Q9HCE5 456 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms