RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PTPRHQ9HD43 1115 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 MRC2Q9UBG0 1479 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
TRAV35-201ENST00000390462 A0A1W2PQH9 124 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 FAM221AA4D161 298 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 CCER2I3L3R5 266 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 PLD2O14939 933 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 SIAH2O43255 324 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 PRPF3O43395 683 aaKnown RBP8.11□□□□□ -1.11
TRAV35-201ENST00000390462 EDN3P14138 238 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 PURAQ00577 322 aaKnown RBP8.11□□□□□ -1.11
TRAV35-201ENST00000390462 FNDC3BQ53EP0 1204 aaKnown RBP8.11□□□□□ -1.11
TRAV35-201ENST00000390462 PEAR1Q5VY43 1037 aaPredicted RBP8.11□□□□□ -1.11
TRAV35-201ENST00000390462 CNNM4Q6P4Q7 775 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 LIAT1Q6ZQX7 453 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 ZBTB46Q86UZ6 589 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 NLRP8Q86W28 1048 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
TRAV35-201ENST00000390462 YIPF4Q9BSR8 244 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 ZHX3Q9H4I2 956 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 LIN7BQ9HAP6 207 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 DZANK1Q9NVP4 752 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 NRBP1Q9UHY1 535 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 ZNF180Q9UJW8 692 aa8.11□□□□□ -1.11
TRAV35-201ENST00000390462 ZNF500O60304 480 aaPredicted RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 RAPGEF3O95398 923 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 ADH1CP00326 375 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 EFCAB2Q5VUJ9 269 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 RNF219Q5W0B1 726 aaPredicted RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 TMEM214Q6NUQ4 689 aaKnown RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 RUFY4Q6ZNE9 571 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 LRRTM3Q86VH5 581 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 LRRC47Q8N1G4 583 aaKnown RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 WDR66Q8TBY9 1149 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 RHBDD1Q8TEB9 315 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 JARID2Q92833 1246 aaPredicted RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 RUNDC1Q96C34 613 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 HSH2DQ96JZ2 352 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 CCDC8Q9H0W5 538 aaPredicted RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 NCOA5Q9HCD5 579 aaKnown RBP8.1□□□□□ -1.11
TRAV35-201ENST00000390462 PGPEP1Q9NXJ5 209 aa8.1□□□□□ -1.11
TRAV35-201ENST00000390462 ENC1O14682 589 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 RFPL1O75677 317 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 TRIM27P14373 513 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 CCNFP41002 786 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 TRAPPC10P48553 1259 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 NR5A1Q13285 461 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 ZNF280DQ6N043 979 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 PODNQ7Z5L7 613 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 TTC6Q86TZ1 520 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 KLRG1Q96E93 195 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 NECAB3Q96P71 396 aaPredicted RBP8.09□□□□□ -1.11
TRAV35-201ENST00000390462 MIR1-1HGQ9H1L0 117 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 OBP2AQ9NY56 170 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 USP25Q9UHP3 1055 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
TRAV35-201ENST00000390462 ARHGEF11O15085 1522 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 UPK3BL1B0FP48 263 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 UPK3BL2E5RIL1 263 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 XYLBO75191 536 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 ADH1AP07327 375 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 LMNB1P20700 586 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 STRN3Q13033 797 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 FAM83BQ5T0W9 1011 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 IL31Q6EBC2 164 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 ERAP2Q6P179 960 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 NLRP13Q86W25 1043 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 LEO1Q8WVC0 666 aaPredicted RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 KISS1RQ969F8 398 aaPredicted RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 TCF12Q99081 682 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 INO80BQ9C086 356 aaPredicted RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 INTS7Q9NVH2 962 aaKnown RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 PCDHB5Q9Y5E4 795 aa8.08□□□□□ -1.12
TRAV35-201ENST00000390462 GPC6Q9Y625 555 aaPredicted RBP8.08□□□□□ -1.12
TRAV35-201ENST00000390462 PEG3Q9GZU2 1588 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 WNT7AO00755 349 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 GPR39O43194 453 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 CILPO75339 1184 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 MYL3P08590 195 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 ARAFP10398 606 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 L1CAMP32004 1257 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 NEK3P51956 506 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 PICALMQ13492 652 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 LHFPL2Q6ZUX7 228 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
TRAV35-201ENST00000390462 JPH3Q8WXH2 748 aaPredicted RBP8.07□□□□□ -1.12
TRAV35-201ENST00000390462 EHMT1Q9H9B1 1298 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 SPEF1Q9Y4P9 236 aa8.07□□□□□ -1.12
TRAV35-201ENST00000390462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
TRAV35-201ENST00000390462 VSTM5A8MXK1 200 aa8.06□□□□□ -1.12
TRAV35-201ENST00000390462 MEN1O00255 615 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms