RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ESR2Q92731 530 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 HAUS7Q99871 368 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 HINFPQ9BQA5 517 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 CDK12Q9NYV4 1490 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 AP5Z1O43299 807 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 OPA1O60313 960 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 MAGEB6Q8N7X4 407 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 KDRP35968 1356 aa14.87□□□□□ -0.03
TRAPPC9-201ENST00000389328 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 UQCRFS1P1P0C7P4 283 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 PARD6BQ9BYG5 372 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 CYP7A1P22680 504 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 SLFNL1Q499Z3 407 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 RABGGTAQ92696 567 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 PSMB7Q99436 277 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 EXOC1Q9NV70 894 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 ATP7BP35670 1465 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 ABCA6Q8N139 1617 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 FGAP02671 866 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 CYP26C1Q6V0L0 522 aa14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 CMTR1Q8N1G2 835 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
TRAPPC9-201ENST00000389328 MBD4O95243 580 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 CCDC40Q4G0X9 1142 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 GOLGA6CA6NDK9 693 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 CTIFO43310 598 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 GOLGA6DP0CG33 693 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 KRT2P35908 639 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 TMTC1Q8IUR5 882 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 FAM114A1Q8IWE2 563 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 VAT1LQ9HCJ6 419 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 GOLGA6AQ9NYA3 693 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 STX10O60499 249 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 ARID5AQ03989 594 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 TSG101Q99816 390 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 TET3O43151 1660 aa14.85□□□□□ -0.03
TRAPPC9-201ENST00000389328 ASIC1P78348 528 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 GOLGA5Q8TBA6 731 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 PHLPP2Q6ZVD8 1323 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 BTBD18B2RXH4 712 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 DYDC1Q8WWB3 177 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 PPM1EQ8WY54 764 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 TMEM87BQ96K49 555 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 NDUFAB1O14561 156 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 CAVIN4Q5BKX8 364 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 CEP57Q86XR8 500 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 PLBD2Q8NHP8 589 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 BLZF1Q9H2G9 400 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 COBLO75128 1261 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 CTDSPL2Q05D32 466 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 PRPF4BQ13523 1007 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 SLC39A14Q15043 492 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 CABLES1Q8TDN4 633 aa14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 CCDC43Q96MW1 224 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-201ENST00000389328 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.03
TRAPPC9-201ENST00000389328 TICAM2Q86XR7 235 aa14.83□□□□□ -0.03
TRAPPC9-201ENST00000389328 TBC1D8BQ0IIM8 1120 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 TUBB2AQ13885 445 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 AIFM3Q96NN9 605 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 TUBB2BQ9BVA1 445 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 POLR3EQ9NVU0 708 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 FAN1Q9Y2M0 1017 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 RRP15Q9Y3B9 282 aaKnown RBP14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 A1BGP04217 495 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 VAV2P52735 878 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 LRRC24Q50LG9 513 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 COPRSQ9NQ92 184 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 WWC3Q9ULE0 1092 aa14.83□□□□□ -0.04
TRAPPC9-201ENST00000389328 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 ANKRD65E5RJM6 399 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 IKBKBO14920 756 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 ARMT1Q9H993 441 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 V9GY48 417 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 DEXIO95424 95 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 SND1Q7KZF4 910 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 SRGAP1Q7Z6B7 1085 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 CALML4Q96GE6 196 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 SEC63Q9UGP8 760 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 SHROOM2Q13796 1616 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 KIF5BP33176 963 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 AMPD3Q01432 767 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 IQCB1Q15051 598 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 GRAMD1CQ8IYS0 662 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 PLEKHA4Q9H4M7 779 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 CDC23Q9UJX2 597 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 RNASE9P60153 205 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 CFAP58Q5T655 872 aa14.82□□□□□ -0.04
TRAPPC9-201ENST00000389328 SLC35F6Q8N357 371 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms