RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 OSBPL5Q9H0X9 879 aaPredicted RBP24.1■■□□□ 1.45
CDPF1-202ENST00000381037 MKRN1Q9UHC7 482 aaKnown RBP24.1■■□□□ 1.45
CDPF1-202ENST00000381037 FZD1Q9UP38 647 aa24.1■■□□□ 1.45
CDPF1-202ENST00000381037 COL2A1P02458 1487 aaPredicted RBP24.1■■□□□ 1.45
CDPF1-202ENST00000381037 DDTLA6NHG4 134 aaPredicted RBP24.1■■□□□ 1.45
CDPF1-202ENST00000381037 GSPT1P15170 499 aaKnown RBP24.1■■□□□ 1.45
CDPF1-202ENST00000381037 MAP3K11Q16584 847 aa24.1■■□□□ 1.45
CDPF1-202ENST00000381037 MOB2Q70IA6 237 aa24.1■■□□□ 1.45
CDPF1-202ENST00000381037 FLT1P17948 1338 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 PAPPA2Q9BXP8 1791 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 RASSF10A6NK89 507 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 USP2O75604 605 aaPredicted RBP24.09■■□□□ 1.45
CDPF1-202ENST00000381037 LRRFIP1Q32MZ4 808 aaKnown RBP24.09■■□□□ 1.45
CDPF1-202ENST00000381037 TTC22Q5TAA0 569 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 SKAP1Q86WV1 359 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 DNAJC5GQ8N7S2 189 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 ARMT1Q9H993 441 aa24.09■■□□□ 1.45
CDPF1-202ENST00000381037 CDK5RAP2Q96SN8 1893 aa24.08■■□□□ 1.45
CDPF1-202ENST00000381037 MBD4O95243 580 aa24.08■■□□□ 1.45
CDPF1-202ENST00000381037 ZMYM1Q5SVZ6 1142 aa24.08■■□□□ 1.45
CDPF1-202ENST00000381037 MAPKAPK5Q8IW41 473 aa24.08■■□□□ 1.45
CDPF1-202ENST00000381037 HHIPL1Q96JK4 782 aa24.08■■□□□ 1.45
CDPF1-202ENST00000381037 ABT1Q9ULW3 272 aaKnown RBP24.08■■□□□ 1.45
CDPF1-202ENST00000381037 TRIM6-TRIM34B2RNG4 842 aa24.07■■□□□ 1.44
CDPF1-202ENST00000381037 MAP3K10Q02779 954 aa24.07■■□□□ 1.44
CDPF1-202ENST00000381037 LDLRAD1Q5T700 205 aa24.07■■□□□ 1.44
CDPF1-202ENST00000381037 FOCADQ5VW36 1801 aa24.07■■□□□ 1.44
CDPF1-202ENST00000381037 PPP1R12BO60237 982 aaPredicted RBP24.06■■□□□ 1.44
CDPF1-202ENST00000381037 HUNKP57058 714 aa24.06■■□□□ 1.44
CDPF1-202ENST00000381037 PRKG1Q13976 671 aa24.06■■□□□ 1.44
CDPF1-202ENST00000381037 STRBPQ96SI9 672 aaKnown RBP24.06■■□□□ 1.44
CDPF1-202ENST00000381037 SEC62Q99442 399 aaKnown RBP24.06■■□□□ 1.44
CDPF1-202ENST00000381037 UBE2Q2LH0YL09 131 aa24.06■■□□□ 1.44
CDPF1-202ENST00000381037 RILPL2Q969X0 211 aa24.06■■□□□ 1.44
CDPF1-202ENST00000381037 CSRNP1Q96S65 589 aa24.06■■□□□ 1.44
CDPF1-202ENST00000381037 CRNKL1Q9BZJ0 848 aaKnown RBP24.06■■□□□ 1.44
CDPF1-202ENST00000381037 M0R2C6 588 aa24.05■■□□□ 1.44
CDPF1-202ENST00000381037 PRKAB2O43741 272 aa24.05■■□□□ 1.44
CDPF1-202ENST00000381037 AIDAQ96BJ3 306 aa24.05■■□□□ 1.44
CDPF1-202ENST00000381037 HOOK2Q96ED9 719 aa24.05■■□□□ 1.44
CDPF1-202ENST00000381037 ANGEL1Q9UNK9 670 aaKnown RBP24.05■■□□□ 1.44
CDPF1-202ENST00000381037 PCNTO95613 3336 aa24.05■■□□□ 1.44
CDPF1-202ENST00000381037 SDSP20132 328 aa24.04■■□□□ 1.44
CDPF1-202ENST00000381037 DEFB115Q30KQ5 88 aa24.04■■□□□ 1.44
CDPF1-202ENST00000381037 ARMC9Q7Z3E5 817 aa24.04■■□□□ 1.44
CDPF1-202ENST00000381037 ZSCAN29Q8IWY8 852 aaPredicted RBP24.04■■□□□ 1.44
CDPF1-202ENST00000381037 SDR42E1Q8WUS8 393 aa24.04■■□□□ 1.44
CDPF1-202ENST00000381037 KLRG1Q96E93 195 aa24.04■■□□□ 1.44
CDPF1-202ENST00000381037 DHX36Q9H2U1 1008 aaKnown RBP24.04■■□□□ 1.44
CDPF1-202ENST00000381037 USP5P45974 858 aa24.03■■□□□ 1.44
CDPF1-202ENST00000381037 TTLL12Q14166 644 aaPredicted RBP24.03■■□□□ 1.44
CDPF1-202ENST00000381037 MIGA2Q7L4E1 593 aa24.03■■□□□ 1.44
CDPF1-202ENST00000381037 DCP1AQ9NPI6 582 aaPredicted RBP24.03■■□□□ 1.44
CDPF1-202ENST00000381037 PALD1Q9ULE6 856 aa24.03■■□□□ 1.44
CDPF1-202ENST00000381037 UNCXA6NJT0 531 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 GPAA1O43292 621 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 SLURP2P0DP57 97 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 METTL16Q86W50 562 aaKnown RBP24.02■■□□□ 1.44
CDPF1-202ENST00000381037 ZNF112Q9UJU3 913 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 TBC1D12O60347 775 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 DCAF15Q66K64 600 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.02■■□□□ 1.44
CDPF1-202ENST00000381037 FAM227BQ96M60 508 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 ATP8A2Q9NTI2 1148 aa24.02■■□□□ 1.44
CDPF1-202ENST00000381037 IREB2P48200 963 aaKnown RBP24.01■■□□□ 1.43
CDPF1-202ENST00000381037 RGMBQ6NW40 437 aa24.01■■□□□ 1.43
CDPF1-202ENST00000381037 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.01■■□□□ 1.43
CDPF1-202ENST00000381037 HELLSQ9NRZ9 838 aa24.01■■□□□ 1.43
CDPF1-202ENST00000381037 PI4KBQ9UBF8 816 aa24.01■■□□□ 1.43
CDPF1-202ENST00000381037 SAP30BPQ9UHR5 308 aaKnown RBP24.01■■□□□ 1.43
CDPF1-202ENST00000381037 DDX60LQ5H9U9 1706 aaKnown RBP24■■□□□ 1.43
CDPF1-202ENST00000381037 A0A0D9SFI3 127 aa24■■□□□ 1.43
CDPF1-202ENST00000381037 PHF20L1A8MW92 1017 aa24■■□□□ 1.43
CDPF1-202ENST00000381037 ZNF341Q9BYN7 854 aa24■■□□□ 1.43
CDPF1-202ENST00000381037 SLC4A4Q9Y6R1 1079 aa24■■□□□ 1.43
CDPF1-202ENST00000381037 GSG1L2A8MUP6 293 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 VEGFBP49765 207 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 NMIQ13287 307 aaPredicted RBP23.99■■□□□ 1.43
CDPF1-202ENST00000381037 ANKRD13AQ8IZ07 590 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 SIPA1L1O43166 1804 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 FAM155AB1AL88 458 aaPredicted RBP23.99■■□□□ 1.43
CDPF1-202ENST00000381037 MAP3K9P80192 1104 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 CYP4F22Q6NT55 531 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 CLMNQ96JQ2 1002 aa23.99■■□□□ 1.43
CDPF1-202ENST00000381037 AK9Q5TCS8 1911 aa23.98■■□□□ 1.43
CDPF1-202ENST00000381037 FOXP2O15409 715 aa23.98■■□□□ 1.43
CDPF1-202ENST00000381037 PLCD1P51178 756 aa23.98■■□□□ 1.43
CDPF1-202ENST00000381037 FOXP4Q8IVH2 680 aaPredicted RBP23.98■■□□□ 1.43
CDPF1-202ENST00000381037 DNAJC18Q9H819 358 aa23.98■■□□□ 1.43
CDPF1-202ENST00000381037 GNAT2P19087 354 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 MCMDC2Q4G0Z9 681 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 GIMAP6Q6P9H5 292 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 CCDC129Q6ZRS4 1044 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 CAPNS2Q96L46 248 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 WRNIP1Q96S55 665 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 EHD4Q9H223 541 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 MCM9Q9NXL9 1143 aa23.97■■□□□ 1.43
CDPF1-202ENST00000381037 HERC5Q9UII4 1024 aaKnown RBP23.97■■□□□ 1.43
CDPF1-202ENST00000381037 MYH1P12882 1939 aa23.96■■□□□ 1.43
CDPF1-202ENST00000381037 FAM196BA6NMK8 535 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms