RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 PTPAQ15257 358 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 PARP10Q53GL7 1025 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 ADGRA1Q86SQ6 560 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 MAP3K14Q99558 947 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 ARID3AQ99856 593 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 LRP2BPQ9P2M1 347 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 COL22A1Q8NFW1 1626 aaPredicted RBP23.22■■□□□ 1.31
EBF1-202ENST00000380654 SHC4Q6S5L8 630 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 CMTR1Q8N1G2 835 aaKnown RBP23.22■■□□□ 1.31
EBF1-202ENST00000380654 CLIC6Q96NY7 704 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 BCORQ6W2J9 1755 aa23.22■■□□□ 1.31
EBF1-202ENST00000380654 SMIM22K7EJ46 135 aa23.21■■□□□ 1.31
EBF1-202ENST00000380654 ZRSR1Q15695 479 aaKnown RBP23.21■■□□□ 1.31
EBF1-202ENST00000380654 TIAM2Q8IVF5 1701 aa23.21■■□□□ 1.31
EBF1-202ENST00000380654 ZNF710Q8N1W2 664 aa23.21■■□□□ 1.31
EBF1-202ENST00000380654 CCDC82Q8N4S0 544 aa23.21■■□□□ 1.31
EBF1-202ENST00000380654 U2AF2P26368 475 aaKnown RBP eCLIP23.21■■□□□ 1.31
EBF1-202ENST00000380654 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.21■■□□□ 1.31
EBF1-202ENST00000380654 SSRP1Q08945 709 aaKnown RBP23.2■■□□□ 1.3
EBF1-202ENST00000380654 CNNM2Q9H8M5 875 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 KCNQ2O43526 872 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 CHAF1AQ13111 956 aaPredicted RBP23.2■■□□□ 1.3
EBF1-202ENST00000380654 TRIM29Q14134 588 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 C3orf67Q6ZVT6 689 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 NBPF11Q86T75 865 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 SDR42E1Q8WUS8 393 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 STAG1Q8WVM7 1258 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 KRT23Q9C075 422 aa23.2■■□□□ 1.3
EBF1-202ENST00000380654 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 SYKP43405 635 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 UBE2Q2Q8WVN8 375 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 ABCF2Q9UG63 623 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 BCL9LQ86UU0 1499 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 FMNL1O95466 1100 aaPredicted RBP23.19■■□□□ 1.3
EBF1-202ENST00000380654 GYG1P46976 350 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 RGS22Q8NE09 1264 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 NACAP1Q9BZK3 213 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 KCNJ14Q9UNX9 436 aa23.19■■□□□ 1.3
EBF1-202ENST00000380654 RREB1Q92766 1687 aa23.18■■□□□ 1.3
EBF1-202ENST00000380654 PPP6R2O75170 966 aa23.18■■□□□ 1.3
EBF1-202ENST00000380654 CYP7A1P22680 504 aa23.18■■□□□ 1.3
EBF1-202ENST00000380654 NLRP12P59046 1061 aa23.18■■□□□ 1.3
EBF1-202ENST00000380654 HPSEQ9Y251 543 aa23.18■■□□□ 1.3
EBF1-202ENST00000380654 USP27XA6NNY8 438 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 BTBD18B2RXH4 712 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 KCNQ4P56696 695 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 CDCA7Q9BWT1 371 aaPredicted RBP23.17■■□□□ 1.3
EBF1-202ENST00000380654 LAMB2P55268 1798 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
EBF1-202ENST00000380654 IFNAR1P17181 557 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 GNAT2P19087 354 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 WTAPQ15007 396 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 SMIM5Q71RC9 77 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 STK36Q9NRP7 1315 aa23.17■■□□□ 1.3
EBF1-202ENST00000380654 NRAPQ86VF7 1730 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 TNNT1P13805 278 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
EBF1-202ENST00000380654 TPD52L1Q16890 204 aaPredicted RBP23.16■■□□□ 1.3
EBF1-202ENST00000380654 ERFEQ4G0M1 354 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 MAP7D2Q96T17 732 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 BPIFA3Q9BQP9 254 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 BCL2L12Q9HB09 334 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 MINDY4BA8MYZ0 360 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 SKILP12757 684 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 CCZ1BP86790 482 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 CCZ1P86791 482 aaPredicted RBP23.16■■□□□ 1.3
EBF1-202ENST00000380654 PNOCQ13519 176 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 NCAPHQ15003 741 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 RTN1Q16799 776 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 SPECC1Q5M775 1068 aa23.16■■□□□ 1.3
EBF1-202ENST00000380654 XPO4Q9C0E2 1151 aaKnown RBP23.16■■□□□ 1.3
EBF1-202ENST00000380654 PPARAQ07869 468 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 RESP18Q5W5W9 173 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 IFNKQ9P0W0 207 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 COL1A1P02452 1464 aaPredicted RBP23.15■■□□□ 1.3
EBF1-202ENST00000380654 NOSTRINQ8IVI9 506 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 NUP133Q8WUM0 1156 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 RAI14Q9P0K7 980 aa23.15■■□□□ 1.3
EBF1-202ENST00000380654 THRAP3Q9Y2W1 955 aaKnown RBP23.15■■□□□ 1.3
EBF1-202ENST00000380654 NUTM2BA6NNL0 878 aaPredicted RBP23.14■■□□□ 1.3
EBF1-202ENST00000380654 NUTM2EB1AL46 878 aaPredicted RBP23.14■■□□□ 1.3
EBF1-202ENST00000380654 SMC2O95347 1197 aa23.14■■□□□ 1.3
EBF1-202ENST00000380654 MMP1P03956 469 aa23.14■■□□□ 1.3
EBF1-202ENST00000380654 TOB1P50616 345 aaPredicted RBP23.14■■□□□ 1.3
EBF1-202ENST00000380654 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.3
EBF1-202ENST00000380654 NUTM2AQ8IVF1 878 aaPredicted RBP23.14■■□□□ 1.3
EBF1-202ENST00000380654 CICQ96RK0 1608 aaPredicted RBP23.14■■□□□ 1.29
EBF1-202ENST00000380654 LONRF3Q496Y0 759 aa23.14■■□□□ 1.29
EBF1-202ENST00000380654 DIS3L2Q8IYB7 885 aaKnown RBP23.14■■□□□ 1.29
EBF1-202ENST00000380654 TIGD1Q96MW7 591 aa23.14■■□□□ 1.29
EBF1-202ENST00000380654 NID2Q14112 1375 aa23.13■■□□□ 1.29
EBF1-202ENST00000380654 ERICH2A1L162 156 aa23.13■■□□□ 1.29
EBF1-202ENST00000380654 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
EBF1-202ENST00000380654 GRIN1Q05586 938 aa23.13■■□□□ 1.29
EBF1-202ENST00000380654 CDC5LQ99459 802 aaKnown RBP23.13■■□□□ 1.29
EBF1-202ENST00000380654 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.13■■□□□ 1.29
EBF1-202ENST00000380654 TUBE1Q9UJT0 475 aa23.13■■□□□ 1.29
EBF1-202ENST00000380654 BAZ2AQ9UIF9 1905 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms