RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 IDI2Q9BXS1 227 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 GAKO14976 1311 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 ADGRA2Q96PE1 1338 aa28.62■■■□□ 2.17
U2AF1-202ENST00000380276 A0A1B0GUL7 405 aa28.61■■■□□ 2.17
U2AF1-202ENST00000380276 SRGAP3O43295 1099 aa28.61■■■□□ 2.17
U2AF1-202ENST00000380276 GRK4P32298 578 aa28.61■■■□□ 2.17
U2AF1-202ENST00000380276 TFCP2Q12800 502 aa28.61■■■□□ 2.17
U2AF1-202ENST00000380276 AKAP2Q9Y2D5 859 aa28.61■■■□□ 2.17
U2AF1-202ENST00000380276 BRCA2P51587 3418 aa28.6■■■□□ 2.17
U2AF1-202ENST00000380276 FCGRTP55899 365 aa28.6■■■□□ 2.17
U2AF1-202ENST00000380276 GPAT2Q6NUI2 795 aa28.6■■■□□ 2.17
U2AF1-202ENST00000380276 FASTKD5Q7L8L6 764 aaKnown RBP28.6■■■□□ 2.17
U2AF1-202ENST00000380276 XAGE2Q96GT9 111 aa28.6■■■□□ 2.17
U2AF1-202ENST00000380276 NEUROD6Q96NK8 337 aa28.6■■■□□ 2.17
U2AF1-202ENST00000380276 PHF20L1A8MW92 1017 aa28.59■■■□□ 2.17
U2AF1-202ENST00000380276 GNAI3P08754 354 aa28.59■■■□□ 2.17
U2AF1-202ENST00000380276 PTPRAP18433 802 aa28.59■■■□□ 2.17
U2AF1-202ENST00000380276 MVPQ14764 893 aaKnown RBP28.59■■■□□ 2.17
U2AF1-202ENST00000380276 ERICH6Q7L0X2 663 aa28.59■■■□□ 2.17
U2AF1-202ENST00000380276 SH3BP5LQ7L8J4 393 aa28.59■■■□□ 2.17
U2AF1-202ENST00000380276 ATRNL1Q5VV63 1379 aa28.59■■■□□ 2.17
U2AF1-202ENST00000380276 DDTLA6NHG4 134 aaPredicted RBP28.58■■■□□ 2.17
U2AF1-202ENST00000380276 SLURP2P0DP57 97 aa28.58■■■□□ 2.17
U2AF1-202ENST00000380276 PRKCZQ05513 592 aa28.58■■■□□ 2.17
U2AF1-202ENST00000380276 GORABQ5T7V8 394 aa28.58■■■□□ 2.17
U2AF1-202ENST00000380276 DDX4Q9NQI0 724 aaKnown RBP28.58■■■□□ 2.17
U2AF1-202ENST00000380276 MROH7-TTC4A0A0A0MT08 1334 aa28.58■■■□□ 2.17
U2AF1-202ENST00000380276 A0A0G2JLL6 359 aaPredicted RBP28.57■■■□□ 2.16
U2AF1-202ENST00000380276 RARSP54136 660 aaKnown RBP28.57■■■□□ 2.16
U2AF1-202ENST00000380276 PRRT2Q7Z6L0 340 aaPredicted RBP28.57■■■□□ 2.16
U2AF1-202ENST00000380276 BCRP11274 1271 aa28.56■■■□□ 2.16
U2AF1-202ENST00000380276 UBXN2AP68543 259 aa28.56■■■□□ 2.16
U2AF1-202ENST00000380276 MECOMQ03112 1051 aa28.56■■■□□ 2.16
U2AF1-202ENST00000380276 DOCK1Q14185 1865 aa28.56■■■□□ 2.16
U2AF1-202ENST00000380276 PDS5AQ29RF7 1337 aaKnown RBP28.56■■■□□ 2.16
U2AF1-202ENST00000380276 RFX7Q2KHR2 1363 aa28.56■■■□□ 2.16
U2AF1-202ENST00000380276 COLQQ9Y215 455 aaPredicted RBP28.56■■■□□ 2.16
U2AF1-202ENST00000380276 TRIM75PA6NK02 468 aa28.55■■■□□ 2.16
U2AF1-202ENST00000380276 CCL5P13501 91 aa28.55■■■□□ 2.16
U2AF1-202ENST00000380276 SMCR8Q8TEV9 937 aaPredicted RBP28.55■■■□□ 2.16
U2AF1-202ENST00000380276 DPF3Q92784 378 aa28.55■■■□□ 2.16
U2AF1-202ENST00000380276 RNF208Q9H0X6 261 aa28.55■■■□□ 2.16
U2AF1-202ENST00000380276 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.55■■■□□ 2.16
U2AF1-202ENST00000380276 AFG3L2Q9Y4W6 797 aa28.55■■■□□ 2.16
U2AF1-202ENST00000380276 H0YGN5 161 aa28.54■■■□□ 2.16
U2AF1-202ENST00000380276 CCDC84Q86UT8 332 aaPredicted RBP28.54■■■□□ 2.16
U2AF1-202ENST00000380276 NKX2-3Q8TAU0 364 aa28.54■■■□□ 2.16
U2AF1-202ENST00000380276 SHISA4Q96DD7 197 aa28.54■■■□□ 2.16
U2AF1-202ENST00000380276 FAM163AQ96GL9 167 aaPredicted RBP28.54■■■□□ 2.16
U2AF1-202ENST00000380276 GABRQQ9UN88 632 aa28.54■■■□□ 2.16
U2AF1-202ENST00000380276 MGAMO43451 1857 aa28.53■■■□□ 2.16
U2AF1-202ENST00000380276 CTNND1O60716 968 aaKnown RBP28.53■■■□□ 2.16
U2AF1-202ENST00000380276 FAM196BA6NMK8 535 aa28.52■■■□□ 2.16
U2AF1-202ENST00000380276 ZBTB22O15209 634 aa28.52■■■□□ 2.16
U2AF1-202ENST00000380276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.52■■■□□ 2.16
U2AF1-202ENST00000380276 RAI14Q9P0K7 980 aa28.52■■■□□ 2.16
U2AF1-202ENST00000380276 TAOK2Q9UL54 1235 aa28.52■■■□□ 2.16
U2AF1-202ENST00000380276 GSTO1P78417 241 aa28.51■■■□□ 2.15
U2AF1-202ENST00000380276 PI16Q6UXB8 463 aa28.51■■■□□ 2.15
U2AF1-202ENST00000380276 TBC1D9Q6ZT07 1266 aa28.51■■■□□ 2.15
U2AF1-202ENST00000380276 SLAIN1Q8ND83 568 aa28.51■■■□□ 2.15
U2AF1-202ENST00000380276 ARHGAP45Q92619 1136 aa28.51■■■□□ 2.15
U2AF1-202ENST00000380276 FRAT1Q92837 279 aaPredicted RBP28.51■■■□□ 2.15
U2AF1-202ENST00000380276 HMG20BQ9P0W2 317 aa28.51■■■□□ 2.15
U2AF1-202ENST00000380276 GPR75-ASB3A0A0A6YYF3 556 aa28.5■■■□□ 2.15
U2AF1-202ENST00000380276 TNPO2O14787 897 aaKnown RBP28.5■■■□□ 2.15
U2AF1-202ENST00000380276 LDHCP07864 332 aa28.5■■■□□ 2.15
U2AF1-202ENST00000380276 GJB1P08034 283 aa28.5■■■□□ 2.15
U2AF1-202ENST00000380276 FXR1P51114 621 aaKnown RBP eCLIP28.5■■■□□ 2.15
U2AF1-202ENST00000380276 RHBDL3P58872 404 aa28.5■■■□□ 2.15
U2AF1-202ENST00000380276 SPATA5Q8NB90 893 aa28.5■■■□□ 2.15
U2AF1-202ENST00000380276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.5■■■□□ 2.15
U2AF1-202ENST00000380276 GJA8P48165 433 aa28.49■■■□□ 2.15
U2AF1-202ENST00000380276 MAP3K10Q02779 954 aa28.49■■■□□ 2.15
U2AF1-202ENST00000380276 G3BP1Q13283 466 aaKnown RBP eCLIP28.49■■■□□ 2.15
U2AF1-202ENST00000380276 MTX1Q13505 466 aa28.49■■■□□ 2.15
U2AF1-202ENST00000380276 SLC45A1Q9Y2W3 748 aa28.49■■■□□ 2.15
U2AF1-202ENST00000380276 IPO8O15397 1037 aaKnown RBP28.48■■■□□ 2.15
U2AF1-202ENST00000380276 ADCY3O60266 1144 aa28.48■■■□□ 2.15
U2AF1-202ENST00000380276 GNAI2P04899 355 aa28.48■■■□□ 2.15
U2AF1-202ENST00000380276 AGTPBP1Q9UPW5 1226 aa28.48■■■□□ 2.15
U2AF1-202ENST00000380276 PHIPQ8WWQ0 1821 aa28.48■■■□□ 2.15
U2AF1-202ENST00000380276 PTPRFP10586 1907 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 ELNP15502 786 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 FLT3LGP49771 235 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 CHRDL2Q6WN34 429 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 ZNF384Q8TF68 577 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 CLUAP1Q96AJ1 413 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 NSUN4Q96CB9 384 aaKnown RBP28.47■■■□□ 2.15
U2AF1-202ENST00000380276 NOL10Q9BSC4 688 aaKnown RBP28.47■■■□□ 2.15
U2AF1-202ENST00000380276 HTATIP2Q9BUP3 242 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 UNC93B1Q9H1C4 597 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 LRP2BPQ9P2M1 347 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 TNNQ9UQP3 1299 aa28.47■■■□□ 2.15
U2AF1-202ENST00000380276 TEX11Q8IYF3 940 aa28.46■■■□□ 2.15
U2AF1-202ENST00000380276 ANKRD13CQ8N6S4 541 aa28.46■■■□□ 2.15
U2AF1-202ENST00000380276 PNMA3Q9UL41 463 aa28.46■■■□□ 2.15
U2AF1-202ENST00000380276 TREML2Q5T2D2 321 aa28.45■■■□□ 2.14
U2AF1-202ENST00000380276 U2AF1L4Q8WU68 220 aaKnown RBP28.45■■■□□ 2.14
U2AF1-202ENST00000380276 OSBPL5Q9H0X9 879 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms