RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SSUH2Q9Y2M2 353 aa9.29□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF804BA4D1E1 1349 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 KLRK1P26718 216 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 NTRK3Q16288 839 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 TMEM67Q5HYA8 995 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 SDR42E1Q8WUS8 393 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 ERCC4Q92889 916 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 DNAJC25Q9H1X3 360 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 SCN7AQ01118 1682 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 TIAM2Q8IVF5 1701 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 RANBP6O60518 1105 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 OFD1O75665 1012 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 CYP7A1P22680 504 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 TDO2P48775 406 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 KIF23Q02241 960 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 RRP12Q5JTH9 1297 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 AKNAD1Q5T1N1 836 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 ATL3Q6DD88 541 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 LINC00301Q8NCQ3 95 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 TMEM87BQ96K49 555 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 BSDC1Q9NW68 430 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 MYH2Q9UKX2 1941 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 PNPLA7Q6ZV29 1317 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 IFIT3O14879 490 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 ZBTB43O43298 467 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 MYSM1Q5VVJ2 828 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 SASS6Q6UVJ0 657 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 NFXL1Q6ZNB6 911 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 FSIP1Q8NA03 581 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 ZNF384Q8TF68 577 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 ALG1Q9BT22 464 aa9.28□□□□□ -0.92
PDLIM5-204ENST00000380176 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 A0A1B0GVL5 298 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 MFSD6Q6ZSS7 791 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 SPC24Q8NBT2 197 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 FAM84BQ96KN1 310 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 TOMM22Q9NS69 142 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 RAI14Q9P0K7 980 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 SLC51AQ86UW1 340 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 STK24Q9Y6E0 443 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 MYH13Q9UKX3 1938 aa9.27□□□□□ -0.93
PDLIM5-204ENST00000380176 GOLGA8AA7E2F4 631 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 UBAP1LF5GYI3 381 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 GNPATO15228 680 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 LIFRP42702 1097 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 ZNF165P49910 485 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 DYNLL1P63167 89 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 FAM160A1Q05DH4 1040 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 UBE4AQ14139 1066 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 SLC10A5Q5PT55 438 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 KRT40Q6A162 431 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 CCDC73Q6ZRK6 1079 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 C11orf57Q6ZUT1 292 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 STAG1Q8WVM7 1258 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 NARFQ9UHQ1 456 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 RPS6KA4O75676 772 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 GNAT2P19087 354 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 NDUFA8P51970 172 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 STK38Q15208 465 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 TMCO4Q5TGY1 634 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 BRAPQ7Z569 592 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 CMTR1Q8N1G2 835 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 RIOK1Q9BRS2 568 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 NACAP1Q9BZK3 213 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 SLC12A7Q9Y666 1083 aa9.26□□□□□ -0.93
PDLIM5-204ENST00000380176 CYP2D7A0A087X1C5 515 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 TESPA1A2RU30 521 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 MINDY4BA8MYZ0 360 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 GUCY1A2P33402 732 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 IARSP41252 1262 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 EVX2Q03828 476 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 VPS37DQ86XT2 251 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 CNNM2Q9H8M5 875 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 TAF1LQ8IZX4 1826 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 MAGEB6P1A0A0J9YX57 407 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 CCDC69A6NI79 296 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 SPTLC2O15270 562 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 KINO60870 393 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 WDHD1O75717 1129 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 PPARAQ07869 468 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 SF3A1Q15459 793 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 MRPS27Q92552 414 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 KRT23Q9C075 422 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 KCNF1Q9H3M0 494 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 TFCP2L1Q9NZI6 479 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 COL24A1Q17RW2 1714 aa9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 MARCKSP29966 332 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 RPS8P62241 208 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-204ENST00000380176 CAVIN4Q5BKX8 364 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms