RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SFPQP23246 707 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 CEP85LQ5SZL2 805 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 MAB21L3Q8N8X9 362 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 OR8K1Q8NGG5 319 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 CCDC97Q96F63 343 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 WDR24Q96S15 920 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 MPHOSPH8Q99549 860 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 RTEL1Q9NZ71 1219 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 SLAIN2Q9P270 581 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 LRRIQ3A6PVS8 624 aaPredicted RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 NR1I2O75469 434 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 SYF2O95926 243 aaKnown RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 SLC8A3P57103 927 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 CEP57Q86XR8 500 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 DHX40Q8IX18 779 aaKnown RBP8.52□□□□□ -1.05
CDKL5-201ENST00000379989 LMBR1Q8WVP7 490 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 EHD4Q9H223 541 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 PICK1Q9NRD5 415 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 BLOC1S6Q9UL45 172 aa8.52□□□□□ -1.05
CDKL5-201ENST00000379989 WNK3Q9BYP7 1800 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 RFX7Q2KHR2 1363 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 ATXN2Q99700 1313 aaKnown RBP8.51□□□□□ -1.05
CDKL5-201ENST00000379989 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 VWA3AA6NCI4 1184 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 SNRPA1P09661 255 aaKnown RBP8.51□□□□□ -1.05
CDKL5-201ENST00000379989 PDIA5Q14554 519 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 BEND3Q5T5X7 828 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 THEMIS2Q5TEJ8 643 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 TSHZ1Q6ZSZ6 1077 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 FMNL2Q96PY5 1086 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 KAT14Q9H8E8 782 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-201ENST00000379989 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-201ENST00000379989 SALL3Q9BXA9 1300 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 RASSF9O75901 435 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 RTN3O95197 1032 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-201ENST00000379989 TTLL7Q6ZT98 887 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 FAM177A1Q8N128 213 aaPredicted RBP8.51□□□□□ -1.05
CDKL5-201ENST00000379989 GPATCH3Q96I76 525 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 MAF1Q9H063 256 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 ZSWIM4Q9H7M6 989 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 ATP6V0A4Q9HBG4 840 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 TNS2Q63HR2 1409 aa8.51□□□□□ -1.05
CDKL5-201ENST00000379989 ERLIN1O75477 346 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 IRAK1P51617 712 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 NEXNQ0ZGT2 675 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 ZNF790Q6PG37 636 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 RINLQ6ZS11 566 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 FAM228AQ86W67 206 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 MSANTD4Q8NCY6 345 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 TBC1D5Q92609 795 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 LTV1Q96GA3 475 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 MEIS3Q99687 375 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 ESYT1Q9BSJ8 1104 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 MMTAG2Q9BU76 263 aaKnown RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 TMX4Q9H1E5 349 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 GOPCQ9HD26 462 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 HOMER3Q9NSC5 361 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 ROBO1Q9Y6N7 1651 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 ZNF831Q5JPB2 1677 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 BECN2A8MW95 431 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 HIP1O00291 1037 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 PDHBP11177 359 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 IMPDH2P12268 514 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 KRT85P78386 507 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 USP4Q13107 963 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 TMC6Q7Z403 805 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 IGSF22Q8N9C0 903 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 BCAS4Q8TDM0 211 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 DHX58Q96C10 678 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 LARP6Q9BRS8 491 aaKnown RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 MEGF6O75095 1541 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 CD151P48509 253 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 SMTNP53814 917 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 FAM173BQ6P4H8 233 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 EZH1Q92800 747 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 KIFC2Q96AC6 838 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 USP44Q9H0E7 712 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 BIN2Q9UBW5 565 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 SAMM50Q9Y512 469 aa8.5□□□□□ -1.05
CDKL5-201ENST00000379989 COL16A1Q07092 1604 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-201ENST00000379989 RGL2O15211 777 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 ZSCAN9O15535 394 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 CDKL5O76039 1030 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 RPSAP08865 295 aaKnown RBP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 SETSIPP0DME0 302 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 TTC5Q8N0Z6 440 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 MKL1Q969V6 931 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 PLEKHG4BQ96PX9 1271 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 NWD2Q9ULI1 1742 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 GRIN2DO15399 1336 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 C5P01031 1676 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 A0A087WWV3 80 aa8.49□□□□□ -1.05
CDKL5-201ENST00000379989 PPP1R12BO60237 982 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-201ENST00000379989 EZRP15311 586 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms