RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 HIBADHP31937 336 aaKnown RBP17.3■□□□□ 0.36
PRNP-201ENST00000379440 ZSCAN30Q86W11 494 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
PRNP-201ENST00000379440 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 SLC12A7Q9Y666 1083 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 LY75O60449 1722 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
PRNP-201ENST00000379440 NTRK3Q16288 839 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 CHD4Q14839 1912 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 EP400Q96L91 3159 aa17.3■□□□□ 0.36
PRNP-201ENST00000379440 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 CYP2D7A0A087X1C5 515 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
PRNP-201ENST00000379440 ME1P48163 572 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 TYRO3Q06418 890 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 MRVI1Q9Y6F6 885 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
PRNP-201ENST00000379440 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 KIF23Q02241 960 aaPredicted RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 CDKL5O76039 1030 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 PLCB2Q00722 1185 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 MECOMQ03112 1051 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 CPLX2Q6PUV4 134 aaKnown RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 MPNDQ8N594 471 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
PRNP-201ENST00000379440 TNRC6CQ9HCJ0 1690 aaKnown RBP17.28■□□□□ 0.36
PRNP-201ENST00000379440 ADCY5O95622 1261 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 PRDX5P30044 214 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.36
PRNP-201ENST00000379440 WTAPQ15007 396 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 TEX2Q8IWB9 1127 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 PLCD3Q8N3E9 789 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 CERKQ8TCT0 537 aa17.27■□□□□ 0.36
PRNP-201ENST00000379440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.27■□□□□ 0.35
PRNP-201ENST00000379440 SEMA3EO15041 775 aa17.27■□□□□ 0.35
PRNP-201ENST00000379440 AP5Z1O43299 807 aa17.27■□□□□ 0.35
PRNP-201ENST00000379440 KRT40Q6A162 431 aa17.27■□□□□ 0.35
PRNP-201ENST00000379440 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.35
PRNP-201ENST00000379440 RNF41Q9H4P4 317 aaPredicted RBP17.27■□□□□ 0.35
PRNP-201ENST00000379440 EVX2Q03828 476 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 SNW1Q13573 536 aaKnown RBP17.26■□□□□ 0.35
PRNP-201ENST00000379440 CNBD1Q8NA66 436 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 SLC26A6Q9BXS9 759 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 SART3Q15020 963 aaKnown RBP17.26■□□□□ 0.35
PRNP-201ENST00000379440 UTP14CQ5TAP6 766 aaKnown RBP17.26■□□□□ 0.35
PRNP-201ENST00000379440 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 BRAPQ7Z569 592 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 CMTR1Q8N1G2 835 aaKnown RBP17.26■□□□□ 0.35
PRNP-201ENST00000379440 CCDC82Q8N4S0 544 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 TMEM51Q9NW97 253 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 AATFQ9NY61 560 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRNP-201ENST00000379440 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
PRNP-201ENST00000379440 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
PRNP-201ENST00000379440 MSNP26038 577 aaKnown RBP17.25■□□□□ 0.35
PRNP-201ENST00000379440 STK38Q15208 465 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 ANO6Q4KMQ2 910 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 ANAPC4Q9UJX5 808 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 ERICH2A1L162 156 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 PRDM1O75626 825 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 QTRT2Q9H974 415 aaKnown RBP17.25■□□□□ 0.35
PRNP-201ENST00000379440 CCDC39Q9UFE4 941 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 IRS2Q9Y4H2 1338 aa17.25■□□□□ 0.35
PRNP-201ENST00000379440 PTMAP06454 111 aaKnown RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 PRR5LQ6MZQ0 368 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 LUZP1Q86V48 1076 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 ENGASEQ8NFI3 743 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 ZNF830Q96NB3 372 aaPredicted RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 BAZ2AQ9UIF9 1905 aaKnown RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 GRAPQ13588 217 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 CTR9Q6PD62 1173 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 NUP133Q8WUM0 1156 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 GPR101Q96P66 508 aaPredicted RBP17.24■□□□□ 0.35
PRNP-201ENST00000379440 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 USP17L12C9JPN9 530 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 USP17L21D6R901 530 aa17.24■□□□□ 0.35
PRNP-201ENST00000379440 ESR2Q92731 530 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms