RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SP3Q02447 781 aa23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 TNNI3KQ59H18 835 aa23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 GORABQ5T7V8 394 aa23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 SH3BP5LQ7L8J4 393 aa23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 NSUN4Q96CB9 384 aaKnown RBP23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 FPGT-TNNI3KV9GXZ4 949 aa23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 HTTP42858 3142 aa23.27■■□□□ 1.32
TMEM88B-201ENST00000378821 BTDP43251 543 aa23.26■■□□□ 1.31
TMEM88B-201ENST00000378821 ZNF512BQ96KM6 892 aaPredicted RBP23.26■■□□□ 1.31
TMEM88B-201ENST00000378821 ZFYVE28Q9HCC9 887 aa23.26■■□□□ 1.31
TMEM88B-201ENST00000378821 DDX4Q9NQI0 724 aaKnown RBP23.26■■□□□ 1.31
TMEM88B-201ENST00000378821 BTBD19C9JJ37 291 aa23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 SURF6O75683 361 aaKnown RBP23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 GSTO1P78417 241 aa23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 CAP1Q01518 475 aa23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 TAF1CQ15572 869 aaPredicted RBP23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 TBC1D9Q6ZT07 1266 aa23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 TRIM17Q9Y577 477 aa23.25■■□□□ 1.31
TMEM88B-201ENST00000378821 IGSF3O75054 1194 aa23.24■■□□□ 1.31
TMEM88B-201ENST00000378821 LDHCP07864 332 aa23.24■■□□□ 1.31
TMEM88B-201ENST00000378821 SOX10P56693 466 aa23.24■■□□□ 1.31
TMEM88B-201ENST00000378821 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
TMEM88B-201ENST00000378821 CD99L2Q8TCZ2 262 aa23.24■■□□□ 1.31
TMEM88B-201ENST00000378821 DDX19BQ9UMR2 479 aa23.24■■□□□ 1.31
TMEM88B-201ENST00000378821 DDTLA6NHG4 134 aaPredicted RBP23.23■■□□□ 1.31
TMEM88B-201ENST00000378821 TLR2O60603 784 aa23.23■■□□□ 1.31
TMEM88B-201ENST00000378821 MOGSQ13724 837 aa23.23■■□□□ 1.31
TMEM88B-201ENST00000378821 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
TMEM88B-201ENST00000378821 PTPN22Q9Y2R2 807 aa23.23■■□□□ 1.31
TMEM88B-201ENST00000378821 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
TMEM88B-201ENST00000378821 TBC1D12O60347 775 aa23.22■■□□□ 1.31
TMEM88B-201ENST00000378821 CEP85Q6P2H3 762 aa23.22■■□□□ 1.31
TMEM88B-201ENST00000378821 ANKRD23Q86SG2 305 aa23.22■■□□□ 1.31
TMEM88B-201ENST00000378821 CXCL11O14625 94 aa23.21■■□□□ 1.31
TMEM88B-201ENST00000378821 CCDC158Q5M9N0 1113 aa23.21■■□□□ 1.31
TMEM88B-201ENST00000378821 EFCC1Q9HA90 598 aa23.21■■□□□ 1.31
TMEM88B-201ENST00000378821 MAST2Q6P0Q8 1798 aa23.21■■□□□ 1.31
TMEM88B-201ENST00000378821 RRP1P56182 461 aaKnown RBP23.2■■□□□ 1.3
TMEM88B-201ENST00000378821 SCYL3Q8IZE3 742 aa23.2■■□□□ 1.3
TMEM88B-201ENST00000378821 RAI14Q9P0K7 980 aa23.2■■□□□ 1.3
TMEM88B-201ENST00000378821 PHIPQ8WWQ0 1821 aa23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 CTNND1O60716 968 aaKnown RBP23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 CYP2E1P05181 493 aaPredicted RBP23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 OS9Q13438 667 aaPredicted RBP23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 TTC39AQ5SRH9 613 aa23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 ZBTB40Q9NUA8 1239 aa23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 LRP2BPQ9P2M1 347 aa23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 DBNLQ9UJU6 430 aaKnown RBP23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 DOCK1Q14185 1865 aa23.19■■□□□ 1.3
TMEM88B-201ENST00000378821 MYO5AQ9Y4I1 1855 aaKnown RBP23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 ADGRA2Q96PE1 1338 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 PTPRAP18433 802 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 PPP4CP60510 307 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 ARHGEF6Q15052 776 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 C17orf99Q6UX52 265 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 ZSCAN29Q8IWY8 852 aaPredicted RBP23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 ARMC5Q96C12 935 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 EAF2Q96CJ1 260 aaPredicted RBP23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 AFG3L2Q9Y4W6 797 aa23.18■■□□□ 1.3
TMEM88B-201ENST00000378821 RBBP6Q7Z6E9 1792 aaKnown RBP23.17■■□□□ 1.3
TMEM88B-201ENST00000378821 PICALMQ13492 652 aa23.17■■□□□ 1.3
TMEM88B-201ENST00000378821 SNRKQ9NRH2 765 aa23.17■■□□□ 1.3
TMEM88B-201ENST00000378821 PTPRFP10586 1907 aa23.17■■□□□ 1.3
TMEM88B-201ENST00000378821 CDK5RAP2Q96SN8 1893 aa23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 A0A0G2JLL6 359 aaPredicted RBP23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 PDHXO00330 501 aa23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 SLURP2P0DP57 97 aa23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 LACTBP83111 547 aaPredicted RBP23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 GPAT2Q6NUI2 795 aa23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 PRRT2Q7Z6L0 340 aaPredicted RBP23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 OSBPL5Q9H0X9 879 aaPredicted RBP23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 FOCADQ5VW36 1801 aa23.16■■□□□ 1.3
TMEM88B-201ENST00000378821 NAA16Q6N069 864 aaPredicted RBP23.15■■□□□ 1.3
TMEM88B-201ENST00000378821 ERC1Q8IUD2 1116 aa23.15■■□□□ 1.3
TMEM88B-201ENST00000378821 PICK1Q9NRD5 415 aa23.15■■□□□ 1.3
TMEM88B-201ENST00000378821 TLR7Q9NYK1 1049 aaKnown RBP23.15■■□□□ 1.3
TMEM88B-201ENST00000378821 ZHX2Q9Y6X8 837 aa23.15■■□□□ 1.3
TMEM88B-201ENST00000378821 GNRH1P01148 92 aa23.14■■□□□ 1.29
TMEM88B-201ENST00000378821 PLCG2P16885 1265 aa23.14■■□□□ 1.29
TMEM88B-201ENST00000378821 ZAP70P43403 619 aa23.14■■□□□ 1.29
TMEM88B-201ENST00000378821 CHMP4BQ9H444 224 aaKnown RBP23.14■■□□□ 1.29
TMEM88B-201ENST00000378821 ZSWIM8A7E2V4 1837 aa23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 BAG3O95817 575 aa23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 FASTKD5Q7L8L6 764 aaKnown RBP23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 ADGRA1Q86SQ6 560 aa23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 CCDC8Q9H0W5 538 aaPredicted RBP23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 PIH1D3Q9NQM4 214 aaKnown RBP23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 SLC45A1Q9Y2W3 748 aa23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 CENPFP49454 3210 aa23.13■■□□□ 1.29
TMEM88B-201ENST00000378821 SIPA1L1O43166 1804 aa23.12■■□□□ 1.29
TMEM88B-201ENST00000378821 HSP90AB4PQ58FF6 505 aa23.12■■□□□ 1.29
TMEM88B-201ENST00000378821 TMED8Q6PL24 325 aaPredicted RBP23.12■■□□□ 1.29
TMEM88B-201ENST00000378821 METTL16Q86W50 562 aaKnown RBP23.12■■□□□ 1.29
TMEM88B-201ENST00000378821 RPAP2Q8IXW5 612 aaPredicted RBP23.12■■□□□ 1.29
TMEM88B-201ENST00000378821 KIF22Q14807 665 aa23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 SIRT2Q8IXJ6 389 aa23.11■■□□□ 1.29
TMEM88B-201ENST00000378821 NOL10Q9BSC4 688 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms