RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 RESP18Q5W5W9 173 aa21■□□□□ 0.95
TDP2-202ENST00000378198 MAGEB6Q8N7X4 407 aa21■□□□□ 0.95
TDP2-202ENST00000378198 ZNF592Q92610 1267 aa21■□□□□ 0.95
TDP2-202ENST00000378198 ZSWIM5Q9P217 1185 aa21■□□□□ 0.95
TDP2-202ENST00000378198 COL14A1Q05707 1796 aaKnown RBP21■□□□□ 0.95
TDP2-202ENST00000378198 IFIT3O14879 490 aaKnown RBP21■□□□□ 0.95
TDP2-202ENST00000378198 RANBP6O60518 1105 aaKnown RBP21■□□□□ 0.95
TDP2-202ENST00000378198 NID2Q14112 1375 aa21■□□□□ 0.95
TDP2-202ENST00000378198 TMC6Q7Z403 805 aa21■□□□□ 0.95
TDP2-202ENST00000378198 HELBQ8NG08 1087 aaPredicted RBP21■□□□□ 0.95
TDP2-202ENST00000378198 EPB41L4AQ9HCS5 686 aaPredicted RBP21■□□□□ 0.95
TDP2-202ENST00000378198 NRDCO43847 1150 aa20.99■□□□□ 0.95
TDP2-202ENST00000378198 MBD4O95243 580 aa20.99■□□□□ 0.95
TDP2-202ENST00000378198 FMNL1O95466 1100 aaPredicted RBP20.99■□□□□ 0.95
TDP2-202ENST00000378198 KCNJ6P48051 423 aa20.99■□□□□ 0.95
TDP2-202ENST00000378198 AKNAD1Q5T1N1 836 aa20.99■□□□□ 0.95
TDP2-202ENST00000378198 GNAT2P19087 354 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 CTDSPL2Q05D32 466 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 WNK3Q9BYP7 1800 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 IFNAR1P17181 557 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 RASGRF1Q13972 1273 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 MFSD6Q6ZSS7 791 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 MPHOSPH8Q99549 860 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 SLC26A6Q9BXS9 759 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 TRMT1Q9NXH9 659 aaKnown RBP20.98■□□□□ 0.95
TDP2-202ENST00000378198 SLIT2O94813 1529 aa20.98■□□□□ 0.95
TDP2-202ENST00000378198 PHLPP1O60346 1717 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 SFPQP23246 707 aaKnown RBP eCLIP20.97■□□□□ 0.95
TDP2-202ENST00000378198 FANCCQ00597 558 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 ELOA2Q8IYF1 753 aaPredicted RBP20.97■□□□□ 0.95
TDP2-202ENST00000378198 MTA3Q9BTC8 594 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 MYL10Q9BUA6 226 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 ARMT1Q9H993 441 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 INCENPQ9NQS7 918 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 PNPLA7Q6ZV29 1317 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 PSDA5PKW4 1024 aaPredicted RBP20.97■□□□□ 0.95
TDP2-202ENST00000378198 GSG1L2A8MUP6 293 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 MYO1BO43795 1136 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 ARMCX5Q6P1M9 558 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 KIF18AQ8NI77 898 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 STAG1Q8WVM7 1258 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 NACAP1Q9BZK3 213 aa20.97■□□□□ 0.95
TDP2-202ENST00000378198 DOT1LQ8TEK3 1739 aa20.96■□□□□ 0.95
TDP2-202ENST00000378198 MYH6P13533 1939 aa20.96■□□□□ 0.95
TDP2-202ENST00000378198 EXOC5O00471 708 aa20.96■□□□□ 0.95
TDP2-202ENST00000378198 CBFA2T2O43439 604 aa20.96■□□□□ 0.95
TDP2-202ENST00000378198 SART3Q15020 963 aaKnown RBP20.96■□□□□ 0.95
TDP2-202ENST00000378198 CGNQ9P2M7 1197 aaKnown RBP20.96■□□□□ 0.95
TDP2-202ENST00000378198 LAMB2P55268 1798 aa20.96■□□□□ 0.95
TDP2-202ENST00000378198 ZNF335Q9H4Z2 1342 aaPredicted RBP20.95■□□□□ 0.95
TDP2-202ENST00000378198 LMOD1P29536 600 aaPredicted RBP20.95■□□□□ 0.94
TDP2-202ENST00000378198 MYL5Q02045 173 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 SAFBQ15424 915 aaKnown RBP eCLIP20.95■□□□□ 0.94
TDP2-202ENST00000378198 ISM2Q6H9L7 571 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 OLFM4Q6UX06 510 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 KRBA2Q6ZNG9 492 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 SYTL4Q96C24 671 aaPredicted RBP20.95■□□□□ 0.94
TDP2-202ENST00000378198 FEZ1Q99689 392 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 TUBB4AP04350 444 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 PNOCQ13519 176 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 SUSD4Q5VX71 490 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 NOSTRINQ8IVI9 506 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 TRIM22Q8IYM9 498 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 TMTC2Q8N394 836 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 KRI1Q8N9T8 703 aaKnown RBP20.95■□□□□ 0.94
TDP2-202ENST00000378198 CLIC6Q96NY7 704 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 KCNH3Q9ULD8 1083 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 TACC3Q9Y6A5 838 aa20.95■□□□□ 0.94
TDP2-202ENST00000378198 MMP1P03956 469 aa20.94■□□□□ 0.94
TDP2-202ENST00000378198 E4F1Q66K89 784 aaPredicted RBP20.94■□□□□ 0.94
TDP2-202ENST00000378198 CNNM3Q8NE01 707 aa20.94■□□□□ 0.94
TDP2-202ENST00000378198 HSD3B7Q9H2F3 369 aa20.94■□□□□ 0.94
TDP2-202ENST00000378198 TDO2P48775 406 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 RCAN1P53805 252 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 EIF5P55010 431 aaKnown RBP20.93■□□□□ 0.94
TDP2-202ENST00000378198 CBX1P83916 185 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 WTAPQ15007 396 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 METTL16Q86W50 562 aaKnown RBP20.93■□□□□ 0.94
TDP2-202ENST00000378198 UTP14AQ9BVJ6 771 aaKnown RBP20.93■□□□□ 0.94
TDP2-202ENST00000378198 HOOK1Q9UJC3 728 aaKnown RBP20.93■□□□□ 0.94
TDP2-202ENST00000378198 TAOK2Q9UL54 1235 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 SLC4A4Q9Y6R1 1079 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 ERICH2A1L162 156 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 RTN1Q16799 776 aa20.93■□□□□ 0.94
TDP2-202ENST00000378198 FOXP1Q9H334 677 aaPredicted RBP20.93■□□□□ 0.94
TDP2-202ENST00000378198 CCDC196A0A1B0GTZ2 297 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 UBASH3AP57075 661 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 LONRF3Q496Y0 759 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 RNF41Q9H4P4 317 aaPredicted RBP20.92■□□□□ 0.94
TDP2-202ENST00000378198 DEXIO95424 95 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 IGHMBP2P38935 993 aaKnown RBP20.92■□□□□ 0.94
TDP2-202ENST00000378198 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 PARP10Q53GL7 1025 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 RILPL1Q5EBL4 403 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 RRP12Q5JTH9 1297 aaKnown RBP20.92■□□□□ 0.94
TDP2-202ENST00000378198 LCORLQ8N3X6 602 aa20.92■□□□□ 0.94
TDP2-202ENST00000378198 RTL9Q8NET4 1388 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 BTBD18B2RXH4 712 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 UBE2Q2LH0YL09 131 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 CCP110O43303 1012 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms