RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 LIMCH1Q9UPQ0 1083 aa17.03■□□□□ 0.32
UBA1-202ENST00000377269 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
UBA1-202ENST00000377269 ZMYM1Q5SVZ6 1142 aa17.03■□□□□ 0.32
UBA1-202ENST00000377269 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
UBA1-202ENST00000377269 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
UBA1-202ENST00000377269 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
UBA1-202ENST00000377269 M0R2C6 588 aa17.02■□□□□ 0.32
UBA1-202ENST00000377269 PDE6AP16499 860 aa17.02■□□□□ 0.32
UBA1-202ENST00000377269 CDC25BP30305 580 aa17.02■□□□□ 0.32
UBA1-202ENST00000377269 MAGEB6Q8N7X4 407 aa17.02■□□□□ 0.32
UBA1-202ENST00000377269 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
UBA1-202ENST00000377269 LTBP1Q14766 1721 aa17.02■□□□□ 0.32
UBA1-202ENST00000377269 ADD2P35612 726 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 TRIM5Q9C035 493 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 NUP62CLQ9H1M0 184 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 SPON1Q9HCB6 807 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 ZNF446Q9NWS9 450 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 MED23Q9ULK4 1368 aa17.02■□□□□ 0.31
UBA1-202ENST00000377269 MAST3O60307 1309 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 PRDX5P30044 214 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 GRIK5Q16478 980 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 RNF20Q5VTR2 975 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 RUFY3Q7L099 469 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 NOL10Q9BSC4 688 aaKnown RBP17.01■□□□□ 0.31
UBA1-202ENST00000377269 RAD50Q92878 1312 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 RFX7Q2KHR2 1363 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 AK2P54819 239 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 BMS1Q14692 1282 aaKnown RBP17.01■□□□□ 0.31
UBA1-202ENST00000377269 ZNF384Q8TF68 577 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■■■□ 25.7
UBA1-202ENST00000377269 KCNQ5Q9NR82 932 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 ST7Q9NRC1 585 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 RAI14Q9P0K7 980 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 CD2APQ9Y5K6 639 aa17.01■□□□□ 0.31
UBA1-202ENST00000377269 SNED1Q8TER0 1413 aa17■□□□□ 0.31
UBA1-202ENST00000377269 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
UBA1-202ENST00000377269 SEMA3EO15041 775 aa17■□□□□ 0.31
UBA1-202ENST00000377269 NEMFO60524 1076 aa17■□□□□ 0.31
UBA1-202ENST00000377269 IL1R1P14778 569 aa17■□□□□ 0.31
UBA1-202ENST00000377269 HNRNPH2P55795 449 aaKnown RBP17■□□□□ 0.31
UBA1-202ENST00000377269 ELF2Q15723 593 aa17■□□□□ 0.31
UBA1-202ENST00000377269 RBM43Q6ZSC3 357 aaKnown RBP17■□□□□ 0.31
UBA1-202ENST00000377269 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
UBA1-202ENST00000377269 ZNF592Q92610 1267 aa17■□□□□ 0.31
UBA1-202ENST00000377269 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
UBA1-202ENST00000377269 FEZ2Q9UHY8 353 aaPredicted RBP17■□□□□ 0.31
UBA1-202ENST00000377269 MAP3K12Q12852 859 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 ANO6Q4KMQ2 910 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
UBA1-202ENST00000377269 ELP1O95163 1332 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 PTPN14Q15678 1187 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 AOC3Q16853 763 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 CCDC144BQ3MJ40 725 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 CCDC144CPQ8IYA2 1237 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 APPBP2Q92624 585 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
UBA1-202ENST00000377269 SLU7O95391 586 aaKnown RBP16.98■□□□□ 0.31
UBA1-202ENST00000377269 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
UBA1-202ENST00000377269 H2AFXP16104 143 aaPredicted RBP16.98■□□□□ 0.31
UBA1-202ENST00000377269 DALRD3Q5D0E6 543 aaKnown RBP16.98■□□□□ 0.31
UBA1-202ENST00000377269 LRRC8AQ8IWT6 810 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
UBA1-202ENST00000377269 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 MXD3Q9BW11 206 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 KCND1Q9NSA2 647 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.98■□□□□ 0.31
UBA1-202ENST00000377269 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
UBA1-202ENST00000377269 LIG1P18858 919 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 GTF2IP78347 998 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 TTC6Q86TZ1 520 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 MIGA1Q8NAN2 632 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.97■□□□□ 0.31
UBA1-202ENST00000377269 V9GYY5 206 aaPredicted RBP16.97■□□□□ 0.31
UBA1-202ENST00000377269 GJB2P29033 226 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 LRRFIP1Q32MZ4 808 aaKnown RBP16.97■□□□□ 0.31
UBA1-202ENST00000377269 FBXW7Q969H0 707 aa16.97■□□□□ 0.31
UBA1-202ENST00000377269 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
UBA1-202ENST00000377269 USP27XA6NNY8 438 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 FOXP2O15409 715 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 MECOMQ03112 1051 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 RASEFQ8IZ41 740 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 MAP4K1Q92918 833 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 EYA3Q99504 573 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 FHDC1Q9C0D6 1143 aaPredicted RBP16.96■□□□□ 0.31
UBA1-202ENST00000377269 TNMDQ9H2S6 317 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 FHOD1Q9Y613 1164 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 KIAA1551Q9HCM1 1747 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 GPAA1O43292 621 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 CYP7A1P22680 504 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 CAMK4Q16566 473 aa16.96■□□□□ 0.31
UBA1-202ENST00000377269 CC2D2BQ6DHV5 1058 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms