RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 FAM160A1Q05DH4 1040 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 PPARAQ07869 468 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 FSIP1Q8NA03 581 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 AIFM3Q96NN9 605 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 TNRC6CQ9HCJ0 1690 aaKnown RBP23.52■■□□□ 1.36
VSX1-202ENST00000376709 ERICH2A1L162 156 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 CTAGE5O15320 804 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 NFIXQ14938 502 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 LINC00301Q8NCQ3 95 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 RGS22Q8NE09 1264 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 KCNG4Q8TDN1 519 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 ZKSCAN3Q9BRR0 538 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 POLR3EQ9NVU0 708 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 PCDHA7Q9UN72 937 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 CLIC4Q9Y696 253 aa23.52■■□□□ 1.36
VSX1-202ENST00000376709 MINDY4BA8MYZ0 360 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 KIF28PB7ZC32 967 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 LUZP1Q86V48 1076 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 CACNA1SQ13698 1873 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 MYH13Q9UKX3 1938 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.51■■□□□ 1.35
VSX1-202ENST00000376709 ZNF500O60304 480 aaPredicted RBP23.51■■□□□ 1.35
VSX1-202ENST00000376709 KLRK1P26718 216 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 SNW1Q13573 536 aaKnown RBP23.51■■□□□ 1.35
VSX1-202ENST00000376709 WTAPQ15007 396 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 ANKRD2Q9GZV1 360 aa23.51■■□□□ 1.35
VSX1-202ENST00000376709 YEATS4O95619 227 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 TM4SF1P30408 202 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 GNL2Q13823 731 aaKnown RBP23.5■■□□□ 1.35
VSX1-202ENST00000376709 NTRK3Q16288 839 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 ADALQ6DHV7 355 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 KRT27Q7Z3Y8 459 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 MRPS27Q92552 414 aaKnown RBP23.5■■□□□ 1.35
VSX1-202ENST00000376709 ECM29Q5VYK3 1845 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 SEMA3EO15041 775 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 TRIM29Q14134 588 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 KRT40Q6A162 431 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 FBXO33Q7Z6M2 555 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 MPNDQ8N594 471 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 CBX8Q9HC52 389 aa23.5■■□□□ 1.35
VSX1-202ENST00000376709 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
VSX1-202ENST00000376709 TRIM37O94972 964 aa23.49■■□□□ 1.35
VSX1-202ENST00000376709 RIOK1Q9BRS2 568 aaKnown RBP23.49■■□□□ 1.35
VSX1-202ENST00000376709 FAM217BQ9NTX9 383 aaPredicted RBP23.49■■□□□ 1.35
VSX1-202ENST00000376709 SPTLC2O15270 562 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 AP5Z1O43299 807 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 RANBP6O60518 1105 aaKnown RBP23.48■■□□□ 1.35
VSX1-202ENST00000376709 SSRP1Q08945 709 aaKnown RBP23.48■■□□□ 1.35
VSX1-202ENST00000376709 ENGASEQ8NFI3 743 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 UBAC1Q9BSL1 405 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 SLC26A6Q9BXS9 759 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 DNAJC25Q9H1X3 360 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.48■■□□□ 1.35
VSX1-202ENST00000376709 ZNF165P49910 485 aa23.48■■□□□ 1.35
VSX1-202ENST00000376709 A0A1W2PQ27 194 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 A0A1W2PQ64 194 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 A0A1W2PQD8 194 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 ADRA2BP18089 450 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 HIBADHP31937 336 aaKnown RBP23.47■■□□□ 1.35
VSX1-202ENST00000376709 ANO1Q5XXA6 986 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 TMTC2Q8N394 836 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 CNBD1Q8NA66 436 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 MTA3Q9BTC8 594 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 TFCP2L1Q9NZI6 479 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 UBR3Q6ZT12 1888 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 STK36Q9NRP7 1315 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 CAVIN2O95810 425 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 DYNLL1P63167 89 aaKnown RBP23.47■■□□□ 1.35
VSX1-202ENST00000376709 ESR2Q92731 530 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 ANAPC4Q9UJX5 808 aa23.47■■□□□ 1.35
VSX1-202ENST00000376709 BAZ2AQ9UIF9 1905 aaKnown RBP23.46■■□□□ 1.35
VSX1-202ENST00000376709 OFD1O75665 1012 aa23.46■■□□□ 1.35
VSX1-202ENST00000376709 RTN1Q16799 776 aa23.46■■□□□ 1.35
VSX1-202ENST00000376709 SLC51AQ86UW1 340 aa23.46■■□□□ 1.35
VSX1-202ENST00000376709 NID2Q14112 1375 aa23.46■■□□□ 1.35
VSX1-202ENST00000376709 A0A1B0GVL5 298 aa23.45■■□□□ 1.35
VSX1-202ENST00000376709 FMNL1O95466 1100 aaPredicted RBP23.45■■□□□ 1.35
VSX1-202ENST00000376709 WASF1Q92558 559 aa23.45■■□□□ 1.35
VSX1-202ENST00000376709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.45■■□□□ 1.34
VSX1-202ENST00000376709 IFNAR1P17181 557 aa23.45■■□□□ 1.34
VSX1-202ENST00000376709 TRIM22Q8IYM9 498 aa23.45■■□□□ 1.34
VSX1-202ENST00000376709 FMR1NBQ8N0W7 255 aaPredicted RBP23.45■■□□□ 1.34
VSX1-202ENST00000376709 ZNF384Q8TF68 577 aa23.45■■□□□ 1.34
VSX1-202ENST00000376709 BRIP1Q9BX63 1249 aa23.45■■□□□ 1.34
VSX1-202ENST00000376709 STX1AQ16623 288 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 SLC27A3Q5K4L6 730 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 NSUN4Q96CB9 384 aaKnown RBP23.44■■□□□ 1.34
VSX1-202ENST00000376709 PDS5AQ29RF7 1337 aaKnown RBP23.44■■□□□ 1.34
VSX1-202ENST00000376709 CCDC196A0A1B0GTZ2 297 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 GYS1P13807 737 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 NDUFA8P51970 172 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 MECOMQ03112 1051 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 CHAF1AQ13111 956 aaPredicted RBP23.44■■□□□ 1.34
VSX1-202ENST00000376709 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.44■■□□□ 1.34
VSX1-202ENST00000376709 SDF4Q9BRK5 362 aa23.44■■□□□ 1.34
VSX1-202ENST00000376709 PRR5LQ6MZQ0 368 aa23.43■■□□□ 1.34
VSX1-202ENST00000376709 ZNF654Q8IZM8 581 aa23.43■■□□□ 1.34
VSX1-202ENST00000376709 NUP133Q8WUM0 1156 aa23.43■■□□□ 1.34
VSX1-202ENST00000376709 ZNF830Q96NB3 372 aaPredicted RBP23.43■■□□□ 1.34
VSX1-202ENST00000376709 TNKSO95271 1327 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms