RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 FAM160A1Q05DH4 1040 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 MAPKAPK5Q8IW41 473 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 NEDD4P46934 1319 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 KIF28PB7ZC32 967 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 URI1O94763 535 aaPredicted RBP11.56□□□□□ -0.56
ZNF550-203ENST00000376230 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
ZNF550-203ENST00000376230 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 HEATR3Q7Z4Q2 680 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 KIF18AQ8NI77 898 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 PFKFB1P16118 471 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 UBASH3AP57075 661 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 APOA5Q6Q788 366 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 TMEM87AQ8NBN3 555 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 MNS1Q8NEH6 495 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 BLZF1Q9H2G9 400 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
ZNF550-203ENST00000376230 COL15A1P39059 1388 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 FOXN1O15353 648 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 ADD2P35612 726 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 ZNF444Q8N0Y2 327 aaPredicted RBP11.55□□□□□ -0.56
ZNF550-203ENST00000376230 FBXO18Q8NFZ0 1043 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
ZNF550-203ENST00000376230 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
ZNF550-203ENST00000376230 ATP1A3P13637 1013 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 KLRK1P26718 216 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 ESR2Q92731 530 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 ISCA1Q9BUE6 129 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 OGFRQ9NZT2 677 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 PRDX5P30044 214 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 KARSQ15046 597 aaKnown RBP11.55□□□□□ -0.56
ZNF550-203ENST00000376230 PIK3AP1Q6ZUJ8 805 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 DYNLL2Q96FJ2 89 aa11.55□□□□□ -0.56
ZNF550-203ENST00000376230 TOP1P11387 765 aaKnown RBP11.54□□□□□ -0.56
ZNF550-203ENST00000376230 GTF2F1P35269 517 aaKnown RBP eCLIP11.54□□□□□ -0.56
ZNF550-203ENST00000376230 ITPK1Q13572 414 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 CCDC34Q96HJ3 373 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 XPO4Q9C0E2 1151 aaKnown RBP11.54□□□□□ -0.56
ZNF550-203ENST00000376230 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 EVX2Q03828 476 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 KCNG4Q8TDN1 519 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 FUCA2Q9BTY2 467 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
ZNF550-203ENST00000376230 PAXBP1Q9Y5B6 917 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 NRXN3Q9Y4C0 1643 aa11.54□□□□□ -0.56
ZNF550-203ENST00000376230 CCT6AP40227 531 aaKnown RBP11.53□□□□□ -0.56
ZNF550-203ENST00000376230 SNW1Q13573 536 aaKnown RBP11.53□□□□□ -0.56
ZNF550-203ENST00000376230 SLC44A5Q8NCS7 719 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 TGFBRAP1Q8WUH2 860 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 TNKSO95271 1327 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 TNS3Q68CZ2 1445 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 KRT222Q8N1A0 295 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 DNAI1Q9UI46 699 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 HOOK1Q9UJC3 728 aaKnown RBP11.53□□□□□ -0.56
ZNF550-203ENST00000376230 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 FDPSP14324 419 aaKnown RBP11.53□□□□□ -0.56
ZNF550-203ENST00000376230 LRRC8AQ8IWT6 810 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
ZNF550-203ENST00000376230 HIBADHP31937 336 aaKnown RBP11.52□□□□□ -0.56
ZNF550-203ENST00000376230 ANTXR2P58335 489 aa11.52□□□□□ -0.56
ZNF550-203ENST00000376230 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.56
ZNF550-203ENST00000376230 PPARAQ07869 468 aa11.52□□□□□ -0.56
ZNF550-203ENST00000376230 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.56
ZNF550-203ENST00000376230 ZNF654Q8IZM8 581 aa11.52□□□□□ -0.56
ZNF550-203ENST00000376230 SERTAD1Q9UHV2 236 aa11.52□□□□□ -0.56
ZNF550-203ENST00000376230 KCNH3Q9ULD8 1083 aa11.52□□□□□ -0.56
ZNF550-203ENST00000376230 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
ZNF550-203ENST00000376230 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 IDEP14735 1019 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 CASP7P55210 303 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 MARCH10Q8NA82 808 aaPredicted RBP11.52□□□□□ -0.57
ZNF550-203ENST00000376230 STRBPQ96SI9 672 aaKnown RBP11.52□□□□□ -0.57
ZNF550-203ENST00000376230 KAT14Q9H8E8 782 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 SMARCE1Q969G3 411 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 HINFPQ9BQA5 517 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 KRT23Q9C075 422 aa11.52□□□□□ -0.57
ZNF550-203ENST00000376230 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.57
ZNF550-203ENST00000376230 KIF20AO95235 890 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 TCP10Q12799 353 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 ZNF274Q96GC6 653 aaPredicted RBP11.51□□□□□ -0.57
ZNF550-203ENST00000376230 PLEKHA8P1O95397 391 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
ZNF550-203ENST00000376230 ADKP55263 362 aaKnown RBP11.51□□□□□ -0.57
ZNF550-203ENST00000376230 GRIN1Q05586 938 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
ZNF550-203ENST00000376230 ARHGAP29Q52LW3 1261 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms