RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 XAGE2Q96GT9 111 aa28.7■■■□□ 2.18
C9orf47-202ENST00000375850 NPM3O75607 178 aaKnown RBP28.69■■■□□ 2.18
C9orf47-202ENST00000375850 ERICH6Q7L0X2 663 aa28.69■■■□□ 2.18
C9orf47-202ENST00000375850 SH3TC2Q8TF17 1288 aa28.69■■■□□ 2.18
C9orf47-202ENST00000375850 SLC45A1Q9Y2W3 748 aa28.69■■■□□ 2.18
C9orf47-202ENST00000375850 MROH7-TTC4A0A0A0MT08 1334 aa28.69■■■□□ 2.18
C9orf47-202ENST00000375850 A0A0G2JLL6 359 aaPredicted RBP28.68■■■□□ 2.18
C9orf47-202ENST00000375850 CTNND1O60716 968 aaKnown RBP28.68■■■□□ 2.18
C9orf47-202ENST00000375850 FMNL1O95466 1100 aaPredicted RBP28.68■■■□□ 2.18
C9orf47-202ENST00000375850 TFCP2Q12800 502 aa28.68■■■□□ 2.18
C9orf47-202ENST00000375850 PRRT2Q7Z6L0 340 aaPredicted RBP28.68■■■□□ 2.18
C9orf47-202ENST00000375850 TRIM47Q96LD4 638 aa28.68■■■□□ 2.18
C9orf47-202ENST00000375850 ZHX2Q9Y6X8 837 aa28.68■■■□□ 2.18
C9orf47-202ENST00000375850 LDHCP07864 332 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 PTPRAP18433 802 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 BTDP43251 543 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 GSTO1P78417 241 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 GPAT2Q6NUI2 795 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 NKX2-3Q8TAU0 364 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 RAET1EQ8TD07 263 aa28.67■■■□□ 2.18
C9orf47-202ENST00000375850 MKI67P46013 3256 aaKnown RBP28.67■■■□□ 2.18
C9orf47-202ENST00000375850 GPR75-ASB3A0A0A6YYF3 556 aa28.66■■■□□ 2.18
C9orf47-202ENST00000375850 BCRP11274 1271 aa28.66■■■□□ 2.18
C9orf47-202ENST00000375850 OSBPP22059 807 aa28.66■■■□□ 2.18
C9orf47-202ENST00000375850 TBC1D12O60347 775 aa28.65■■■□□ 2.18
C9orf47-202ENST00000375850 GNAI2P04899 355 aa28.65■■■□□ 2.18
C9orf47-202ENST00000375850 FCGRTP55899 365 aa28.65■■■□□ 2.18
C9orf47-202ENST00000375850 HABP4Q5JVS0 413 aaKnown RBP28.65■■■□□ 2.18
C9orf47-202ENST00000375850 AFG3L2Q9Y4W6 797 aa28.65■■■□□ 2.18
C9orf47-202ENST00000375850 MYPNQ86TC9 1320 aa28.65■■■□□ 2.18
C9orf47-202ENST00000375850 AK9Q5TCS8 1911 aa28.65■■■□□ 2.18
C9orf47-202ENST00000375850 GRK4P32298 578 aa28.64■■■□□ 2.18
C9orf47-202ENST00000375850 MECOMQ03112 1051 aa28.64■■■□□ 2.18
C9orf47-202ENST00000375850 GORABQ5T7V8 394 aa28.64■■■□□ 2.18
C9orf47-202ENST00000375850 SH3BP5LQ7L8J4 393 aa28.64■■■□□ 2.18
C9orf47-202ENST00000375850 NEUROD6Q96NK8 337 aa28.64■■■□□ 2.18
C9orf47-202ENST00000375850 DDTLA6NHG4 134 aaPredicted RBP28.63■■■□□ 2.17
C9orf47-202ENST00000375850 CTGFP29279 349 aa28.63■■■□□ 2.17
C9orf47-202ENST00000375850 ATF7IPQ6VMQ6 1270 aa28.63■■■□□ 2.17
C9orf47-202ENST00000375850 DOCK2Q92608 1830 aa28.62■■■□□ 2.17
C9orf47-202ENST00000375850 G3BP1Q13283 466 aaKnown RBP eCLIP28.62■■■□□ 2.17
C9orf47-202ENST00000375850 PICALMQ13492 652 aa28.62■■■□□ 2.17
C9orf47-202ENST00000375850 SPATA5Q8NB90 893 aa28.62■■■□□ 2.17
C9orf47-202ENST00000375850 DDX4Q9NQI0 724 aaKnown RBP28.62■■■□□ 2.17
C9orf47-202ENST00000375850 HMG20BQ9P0W2 317 aa28.62■■■□□ 2.17
C9orf47-202ENST00000375850 MYH2Q9UKX2 1941 aa28.62■■■□□ 2.17
C9orf47-202ENST00000375850 COL2A1P02458 1487 aaPredicted RBP28.61■■■□□ 2.17
C9orf47-202ENST00000375850 MYCP01106 439 aaPredicted RBP28.61■■■□□ 2.17
C9orf47-202ENST00000375850 CYP2C8P10632 490 aa28.61■■■□□ 2.17
C9orf47-202ENST00000375850 TRIM27P14373 513 aa28.61■■■□□ 2.17
C9orf47-202ENST00000375850 ARID4AP29374 1257 aaPredicted RBP28.61■■■□□ 2.17
C9orf47-202ENST00000375850 RHBDL3P58872 404 aa28.61■■■□□ 2.17
C9orf47-202ENST00000375850 UBXN2AP68543 259 aa28.61■■■□□ 2.17
C9orf47-202ENST00000375850 TBC1D2Q9BYX2 928 aa28.61■■■□□ 2.17
C9orf47-202ENST00000375850 BRCA2P51587 3418 aa28.6■■■□□ 2.17
C9orf47-202ENST00000375850 UQCRFS1P1P0C7P4 283 aa28.6■■■□□ 2.17
C9orf47-202ENST00000375850 CAPN2P17655 700 aa28.6■■■□□ 2.17
C9orf47-202ENST00000375850 GADL1Q6ZQY3 521 aa28.6■■■□□ 2.17
C9orf47-202ENST00000375850 SLAIN1Q8ND83 568 aa28.6■■■□□ 2.17
C9orf47-202ENST00000375850 OSBPL5Q9H0X9 879 aaPredicted RBP28.6■■■□□ 2.17
C9orf47-202ENST00000375850 IGSF3O75054 1194 aa28.59■■■□□ 2.17
C9orf47-202ENST00000375850 NSUN4Q96CB9 384 aaKnown RBP28.59■■■□□ 2.17
C9orf47-202ENST00000375850 GJB1P08034 283 aa28.58■■■□□ 2.17
C9orf47-202ENST00000375850 SMCR8Q8TEV9 937 aaPredicted RBP28.58■■■□□ 2.17
C9orf47-202ENST00000375850 ZSWIM8A7E2V4 1837 aa28.57■■■□□ 2.16
C9orf47-202ENST00000375850 PRKCZQ05513 592 aa28.57■■■□□ 2.16
C9orf47-202ENST00000375850 MTFR1Q15390 333 aa28.57■■■□□ 2.16
C9orf47-202ENST00000375850 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.57■■■□□ 2.16
C9orf47-202ENST00000375850 RAI14Q9P0K7 980 aa28.57■■■□□ 2.16
C9orf47-202ENST00000375850 BIN2Q9UBW5 565 aaPredicted RBP28.57■■■□□ 2.16
C9orf47-202ENST00000375850 PNMA3Q9UL41 463 aa28.57■■■□□ 2.16
C9orf47-202ENST00000375850 AGTPBP1Q9UPW5 1226 aa28.57■■■□□ 2.16
C9orf47-202ENST00000375850 ECM2O94769 699 aaPredicted RBP28.56■■■□□ 2.16
C9orf47-202ENST00000375850 GJA8P48165 433 aa28.56■■■□□ 2.16
C9orf47-202ENST00000375850 PROCA1Q8NCQ7 364 aaPredicted RBP28.56■■■□□ 2.16
C9orf47-202ENST00000375850 ZNF384Q8TF68 577 aa28.56■■■□□ 2.16
C9orf47-202ENST00000375850 FRAT1Q92837 279 aaPredicted RBP28.56■■■□□ 2.16
C9orf47-202ENST00000375850 NOL10Q9BSC4 688 aaKnown RBP28.56■■■□□ 2.16
C9orf47-202ENST00000375850 GPR108Q9NPR9 543 aa28.56■■■□□ 2.16
C9orf47-202ENST00000375850 TRIM75PA6NK02 468 aa28.55■■■□□ 2.16
C9orf47-202ENST00000375850 LRP2BPQ9P2M1 347 aa28.55■■■□□ 2.16
C9orf47-202ENST00000375850 CCL5P13501 91 aa28.54■■■□□ 2.16
C9orf47-202ENST00000375850 PXYLP1Q8TE99 480 aa28.54■■■□□ 2.16
C9orf47-202ENST00000375850 SHISA4Q96DD7 197 aa28.54■■■□□ 2.16
C9orf47-202ENST00000375850 RNF208Q9H0X6 261 aa28.54■■■□□ 2.16
C9orf47-202ENST00000375850 HERC5Q9UII4 1024 aaKnown RBP28.54■■■□□ 2.16
C9orf47-202ENST00000375850 PNMA6EA0A0J9YXQ4 647 aa28.53■■■□□ 2.16
C9orf47-202ENST00000375850 BAG3O95817 575 aa28.53■■■□□ 2.16
C9orf47-202ENST00000375850 PLCG2P16885 1265 aa28.53■■■□□ 2.16
C9orf47-202ENST00000375850 PABPC4Q13310 644 aaKnown RBP eCLIP28.53■■■□□ 2.16
C9orf47-202ENST00000375850 IRF5Q13568 498 aa28.53■■■□□ 2.16
C9orf47-202ENST00000375850 DHX36Q9H2U1 1008 aaKnown RBP28.53■■■□□ 2.16
C9orf47-202ENST00000375850 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.53■■■□□ 2.16
C9orf47-202ENST00000375850 DOCK1Q14185 1865 aa28.53■■■□□ 2.16
C9orf47-202ENST00000375850 TNPO2O14787 897 aaKnown RBP28.52■■■□□ 2.16
C9orf47-202ENST00000375850 MCAMP43121 646 aa28.52■■■□□ 2.16
C9orf47-202ENST00000375850 PI16Q6UXB8 463 aa28.52■■■□□ 2.16
C9orf47-202ENST00000375850 TBC1D9Q6ZT07 1266 aa28.52■■■□□ 2.16
C9orf47-202ENST00000375850 HTATIP2Q9BUP3 242 aa28.52■■■□□ 2.16
C9orf47-202ENST00000375850 BCAR3O75815 825 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms