RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
MCF2L-202ENST00000375597 PCDHB6Q9Y5E3 794 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 NEDD4P46934 1319 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 KIF6Q6ZMV9 814 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
MCF2L-202ENST00000375597 PSMB7Q99436 277 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 PPP2R2CQ9Y2T4 447 aa13.52□□□□□ -0.25
MCF2L-202ENST00000375597 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 SSRP1Q08945 709 aaKnown RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 SMARCE1Q969G3 411 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 POLD4Q9HCU8 107 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 HSPA2P54652 639 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 RBM43Q6ZSC3 357 aaKnown RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 PPFIBP1Q86W92 1011 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 N4BP2Q86UW6 1770 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 LRRC37A3O60309 1634 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 ERICH2A1L162 156 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
MCF2L-202ENST00000375597 VPS18Q9P253 973 aa13.51□□□□□ -0.25
MCF2L-202ENST00000375597 VWA3AA6NCI4 1184 aa13.5□□□□□ -0.25
MCF2L-202ENST00000375597 ENC1O14682 589 aa13.5□□□□□ -0.25
MCF2L-202ENST00000375597 MATR3P43243 847 aaKnown RBP eCLIP13.5□□□□□ -0.25
MCF2L-202ENST00000375597 HNRNPH2P55795 449 aaKnown RBP13.5□□□□□ -0.25
MCF2L-202ENST00000375597 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
MCF2L-202ENST00000375597 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
MCF2L-202ENST00000375597 ACRBPQ8NEB7 543 aa13.5□□□□□ -0.25
MCF2L-202ENST00000375597 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-202ENST00000375597 DIP2AQ14689 1571 aa13.5□□□□□ -0.25
MCF2L-202ENST00000375597 APPBP2Q92624 585 aa13.5□□□□□ -0.25
MCF2L-202ENST00000375597 NCAPHQ15003 741 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 AXDND1Q5T1B0 1012 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-202ENST00000375597 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 MPHOSPH8Q99549 860 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 SLC4A4Q9Y6R1 1079 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 CCDC66A2RUB6 948 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 PDE4CQ08493 712 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
MCF2L-202ENST00000375597 TRIM22Q8IYM9 498 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
MCF2L-202ENST00000375597 UBAC1Q9BSL1 405 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 ZSWIM5Q9P217 1185 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
MCF2L-202ENST00000375597 FANCGO15287 622 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 TIGD1Q96MW7 591 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 NUP88Q99567 741 aaPredicted RBP13.49□□□□□ -0.25
MCF2L-202ENST00000375597 SEC31BQ9NQW1 1179 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
MCF2L-202ENST00000375597 CAVIN2O95810 425 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 ABL1P00519 1130 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 BCAMP50895 628 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 GUCA1BQ9UMX6 200 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 CMA1P23946 247 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 TAB2Q9NYJ8 693 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 PALLDQ8WX93 1383 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 CBFA2T2O43439 604 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 RAD21O60216 631 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 POSTNQ15063 836 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 IL17RAQ96F46 866 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
MCF2L-202ENST00000375597 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
MCF2L-202ENST00000375597 MORC2Q9Y6X9 1032 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-202ENST00000375597 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 PDE6AP16499 860 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 CDC25BP30305 580 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 MCM7P33993 719 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 RTN1Q16799 776 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 CTNND2Q9UQB3 1225 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 BMP6P22004 513 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 PLA2G4AP47712 749 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 GSPT2Q8IYD1 628 aaKnown RBP13.47□□□□□ -0.25
MCF2L-202ENST00000375597 CCDC191Q8NCU4 936 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 PARD6BQ9BYG5 372 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 CSRNP2Q9H175 543 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 ARFGAP3Q9NP61 516 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 MAN1B1Q9UKM7 699 aa13.47□□□□□ -0.25
MCF2L-202ENST00000375597 V9GY48 417 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms