RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ARMT1Q9H993 441 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 PFKFB2O60825 505 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 PFKFB1P16118 471 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
PTCH1-203ENST00000375274 PAF1Q8N7H5 531 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
PTCH1-203ENST00000375274 KCNQ3O43525 872 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 PRPHP41219 470 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 PPP1R2P41236 205 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 PLCD1P51178 756 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
PTCH1-203ENST00000375274 SAMM50Q9Y512 469 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 A1BGP04217 495 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 ZAP70P43403 619 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 TNNC1P63316 161 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 PAK1Q13153 545 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 AFAP1L1Q8TED9 768 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 PIK3AP1Q6ZUJ8 805 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 RASAL2Q9UJF2 1139 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 PDE4DQ08499 809 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 PUM3Q15397 648 aaKnown RBP12.98□□□□□ -0.33
PTCH1-203ENST00000375274 TTC38Q5R3I4 469 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
PTCH1-203ENST00000375274 PRDM1O75626 825 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 OAS2P29728 719 aaKnown RBP12.97□□□□□ -0.33
PTCH1-203ENST00000375274 PNOCQ13519 176 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 TDRD7Q8NHU6 1098 aaKnown RBP12.97□□□□□ -0.33
PTCH1-203ENST00000375274 KIAA1524Q8TCG1 905 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 NSRP1Q9H0G5 558 aaKnown RBP12.97□□□□□ -0.33
PTCH1-203ENST00000375274 KRT13P13646 458 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 CPLX4Q7Z7G2 160 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 PCDHA7Q9UN72 937 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
PTCH1-203ENST00000375274 TAB2Q9NYJ8 693 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 NRBP1Q9UHY1 535 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 TRAF5O00463 557 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
PTCH1-203ENST00000375274 GPR161Q8N6U8 529 aaKnown RBP12.97□□□□□ -0.33
PTCH1-203ENST00000375274 SV2BQ7L1I2 683 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 STAMQ92783 540 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 TAF5LO75529 589 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.33
PTCH1-203ENST00000375274 CMA1P23946 247 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.33
PTCH1-203ENST00000375274 ANKS4BQ8N8V4 417 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 AATKQ6ZMQ8 1374 aa12.96□□□□□ -0.33
PTCH1-203ENST00000375274 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.34
PTCH1-203ENST00000375274 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.34
PTCH1-203ENST00000375274 C8orf74Q6P047 294 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 HS2ST1Q7LGA3 356 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 JAKMIP2Q96AA8 810 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.34
PTCH1-203ENST00000375274 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.34
PTCH1-203ENST00000375274 NDUFAB1O14561 156 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 RFC4P35249 363 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 FERMT2Q96AC1 680 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 SERTAD1Q9UHV2 236 aa12.96□□□□□ -0.34
PTCH1-203ENST00000375274 A0A1W2PRG0 241 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 NF2P35240 595 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 CCDC77Q9BR77 488 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 ZNF532Q9HCE3 1301 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 TRAF1Q13077 416 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 CCDC114Q96M63 670 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 KDRP35968 1356 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 MYOM2P54296 1465 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 KIF4AO95239 1232 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 RAPGEF1Q13905 1077 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 LONRF3Q496Y0 759 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
PTCH1-203ENST00000375274 HAUS7Q99871 368 aa12.95□□□□□ -0.34
PTCH1-203ENST00000375274 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 GOLGA6CA6NDK9 693 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 GOLGA6DP0CG33 693 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 LPIN2Q92539 896 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 NUP58Q9BVL2 599 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 STMN4Q9H169 189 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-203ENST00000375274 GOLGA6AQ9NYA3 693 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 NDUFA8P51970 172 aa12.94□□□□□ -0.34
PTCH1-203ENST00000375274 PICALMQ13492 652 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms