RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 PRKAG2Q9UGJ0 569 aa11.9□□□□□ -0.5
HLA-DOA-202ENST00000374813 AFG3L2Q9Y4W6 797 aa11.9□□□□□ -0.5
HLA-DOA-202ENST00000374813 FOSL2P15408 326 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 PTPRAP18433 802 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 FOXO4P98177 505 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 GRIK5Q16478 980 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 CAVIN4Q5BKX8 364 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 FBXO33Q7Z6M2 555 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 GJD2Q9UKL4 321 aa11.89□□□□□ -0.51
HLA-DOA-202ENST00000374813 A0A1B0GUL6 1792 aa11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 HOXD11P31277 338 aaPredicted RBP11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 CHAF1AQ13111 956 aaPredicted RBP11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 LRRC26Q2I0M4 334 aa11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 TRMT44Q8IYL2 757 aaKnown RBP11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 SCYL3Q8IZE3 742 aa11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 MYLIPQ8WY64 445 aa11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
HLA-DOA-202ENST00000374813 TMEM265A0A087WTH1 108 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 SMAD3P84022 425 aaKnown RBP11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 TCP10Q12799 353 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 WDR43Q15061 677 aaKnown RBP eCLIP11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 RALBP1Q15311 655 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 LMBR1LQ6UX01 489 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 DNAAF4Q8WXU2 420 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 ZNF594Q96JF6 807 aaPredicted RBP11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 RAPGEFL1Q9UHV5 662 aa11.87□□□□□ -0.51
HLA-DOA-202ENST00000374813 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 CTNND1O60716 968 aaKnown RBP11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 TRIM32Q13049 653 aa11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 PABPC4Q13310 644 aaKnown RBP eCLIP11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 IQSEC3Q9UPP2 1182 aaPredicted RBP11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
HLA-DOA-202ENST00000374813 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
HLA-DOA-202ENST00000374813 PROCA1Q8NCQ7 364 aaPredicted RBP11.85□□□□□ -0.51
HLA-DOA-202ENST00000374813 TRIB2Q92519 343 aa11.85□□□□□ -0.51
HLA-DOA-202ENST00000374813 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
HLA-DOA-202ENST00000374813 ARIH1Q9Y4X5 557 aaPredicted RBP11.85□□□□□ -0.51
HLA-DOA-202ENST00000374813 PIEZO1Q92508 2521 aa11.85□□□□□ -0.51
HLA-DOA-202ENST00000374813 TRIM75PA6NK02 468 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 CYP2B6P20813 491 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 FLIIQ13045 1269 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 FKBP5Q13451 457 aaPredicted RBP11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 SHHQ15465 462 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 LHX8Q68G74 356 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 CDC42EP5Q6NZY7 148 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 ATXN2LQ8WWM7 1075 aaKnown RBP11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 SENP6Q9GZR1 1112 aaPredicted RBP11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 PTPRFP10586 1907 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 MYO9BQ13459 2157 aa11.84□□□□□ -0.51
HLA-DOA-202ENST00000374813 MAP3K10Q02779 954 aa11.83□□□□□ -0.52
HLA-DOA-202ENST00000374813 G2E3Q7L622 706 aa11.83□□□□□ -0.52
HLA-DOA-202ENST00000374813 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
HLA-DOA-202ENST00000374813 SOCS4Q8WXH5 440 aa11.83□□□□□ -0.52
HLA-DOA-202ENST00000374813 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
HLA-DOA-202ENST00000374813 CACNA1FO60840 1977 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 NFIAQ12857 509 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 PDE3AQ14432 1141 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 TREML2Q5T2D2 321 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 C1QTNF1Q9BXJ1 281 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 USP40Q9NVE5 1235 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 DAGLAQ9Y4D2 1042 aa11.82□□□□□ -0.52
HLA-DOA-202ENST00000374813 ZSCAN29Q8IWY8 852 aaPredicted RBP11.81□□□□□ -0.52
HLA-DOA-202ENST00000374813 MORF4L1Q9UBU8 362 aa11.81□□□□□ -0.52
HLA-DOA-202ENST00000374813 SYNGAP1Q96PV0 1343 aa11.81□□□□□ -0.52
HLA-DOA-202ENST00000374813 MSCO60682 206 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 ENTPD3O75355 529 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 PDE8BO95263 885 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 MAPK4P31152 587 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 EPHA10Q5JZY3 1008 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 CCAR1Q8IX12 1150 aaKnown RBP11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 ASB2Q96Q27 587 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 IDI2Q9BXS1 227 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 PUS3Q9BZE2 481 aaKnown RBP11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 ASCC2Q9H1I8 757 aaPredicted RBP11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
HLA-DOA-202ENST00000374813 GRM8O00222 908 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 APAF1O14727 1248 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 IFIT1P09914 478 aaKnown RBP11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 CCND3P30281 292 aaPredicted RBP11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 RGS2P41220 211 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 SPP2Q13103 211 aa11.79□□□□□ -0.52
HLA-DOA-202ENST00000374813 METTL24Q5JXM2 366 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms