RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZDHHC9Q9Y397 364 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 ERCC6L2Q5T890 1561 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 GIMAP7Q8NHV1 300 aa19.69■□□□□ 0.74
PTPRU-202ENST00000373779 NDUFA8P51970 172 aa19.68■□□□□ 0.74
PTPRU-202ENST00000373779 WDHD1O75717 1129 aaPredicted RBP19.68■□□□□ 0.74
PTPRU-202ENST00000373779 CMA1P23946 247 aa19.68■□□□□ 0.74
PTPRU-202ENST00000373779 PDIA3P30101 505 aaKnown RBP19.68■□□□□ 0.74
PTPRU-202ENST00000373779 DBNLQ9UJU6 430 aaKnown RBP19.68■□□□□ 0.74
PTPRU-202ENST00000373779 ROBO2Q9HCK4 1378 aa19.68■□□□□ 0.74
PTPRU-202ENST00000373779 SPECC1LQ69YQ0 1117 aa19.68■□□□□ 0.74
PTPRU-202ENST00000373779 KRBA2Q6ZNG9 492 aa19.68■□□□□ 0.74
PTPRU-202ENST00000373779 RPGRQ92834 1020 aaKnown RBP19.67■□□□□ 0.74
PTPRU-202ENST00000373779 RBM6P78332 1123 aaKnown RBP19.67■□□□□ 0.74
PTPRU-202ENST00000373779 ERCC6LQ2NKX8 1250 aa19.67■□□□□ 0.74
PTPRU-202ENST00000373779 ATP6V1AP38606 617 aa19.67■□□□□ 0.74
PTPRU-202ENST00000373779 CTDSPL2Q05D32 466 aa19.67■□□□□ 0.74
PTPRU-202ENST00000373779 C6orf50Q9HD87 102 aa19.67■□□□□ 0.74
PTPRU-202ENST00000373779 MAP2K1Q02750 393 aaPredicted RBP19.67■□□□□ 0.74
PTPRU-202ENST00000373779 TRMT44Q8IYL2 757 aaKnown RBP19.67■□□□□ 0.74
PTPRU-202ENST00000373779 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
PTPRU-202ENST00000373779 CYP21A2P08686 494 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 PRPF4BQ13523 1007 aaKnown RBP19.66■□□□□ 0.74
PTPRU-202ENST00000373779 NECTIN1Q15223 517 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 DHX37Q8IY37 1157 aaKnown RBP19.66■□□□□ 0.74
PTPRU-202ENST00000373779 CUL5Q93034 780 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 SPAG5Q96R06 1193 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 A0A1W2PQ27 194 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 A0A1W2PQ64 194 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 A0A1W2PQD8 194 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 TMEM132AQ24JP5 1023 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 KCNJ14Q9UNX9 436 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 GCOM1H8Y6P7 765 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-202ENST00000373779 MYZAPP0CAP1 466 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 C11orf57Q6ZUT1 292 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-202ENST00000373779 CACTINQ8WUQ7 758 aaKnown RBP19.66■□□□□ 0.74
PTPRU-202ENST00000373779 RTEL1Q9NZ71 1219 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 CEP152O94986 1710 aa19.66■□□□□ 0.74
PTPRU-202ENST00000373779 NSUN7Q8NE18 718 aaKnown RBP19.65■□□□□ 0.74
PTPRU-202ENST00000373779 PLIN2Q99541 437 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 CLIC4Q9Y696 253 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 TSGA10Q9BZW7 698 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 TMTC1Q8IUR5 882 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 MCM9Q9NXL9 1143 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 V9GY48 417 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-202ENST00000373779 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 CALRP27797 417 aaKnown RBP19.65■□□□□ 0.74
PTPRU-202ENST00000373779 ETF1P62495 437 aaKnown RBP19.65■□□□□ 0.74
PTPRU-202ENST00000373779 PAK1Q13153 545 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 SERTAD1Q9UHV2 236 aa19.65■□□□□ 0.74
PTPRU-202ENST00000373779 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.74
PTPRU-202ENST00000373779 CYP2E1P05181 493 aaPredicted RBP19.64■□□□□ 0.74
PTPRU-202ENST00000373779 SSR1P43307 286 aaKnown RBP19.64■□□□□ 0.74
PTPRU-202ENST00000373779 TTC38Q5R3I4 469 aa19.64■□□□□ 0.74
PTPRU-202ENST00000373779 ZMYM6O95789 1325 aa19.64■□□□□ 0.73
PTPRU-202ENST00000373779 PSDA5PKW4 1024 aaPredicted RBP19.64■□□□□ 0.73
PTPRU-202ENST00000373779 PDE8AO60658 829 aa19.64■□□□□ 0.73
PTPRU-202ENST00000373779 NBPF5PQ86XG9 351 aaPredicted RBP19.64■□□□□ 0.73
PTPRU-202ENST00000373779 OAS2P29728 719 aaKnown RBP19.64■□□□□ 0.73
PTPRU-202ENST00000373779 ADKP55263 362 aaKnown RBP19.64■□□□□ 0.73
PTPRU-202ENST00000373779 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
PTPRU-202ENST00000373779 NEK11Q8NG66 645 aa19.64■□□□□ 0.73
PTPRU-202ENST00000373779 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.73
PTPRU-202ENST00000373779 TNIP1Q15025 636 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 GPR161Q8N6U8 529 aaKnown RBP19.63■□□□□ 0.73
PTPRU-202ENST00000373779 TAOK3Q9H2K8 898 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 MACROD2A1Z1Q3 448 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 PHKG2P15735 406 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 LPIN2Q92539 896 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 IQGAP1P46940 1657 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 REREQ9P2R6 1566 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 SELENOOQ9BVL4 669 aa19.63■□□□□ 0.73
PTPRU-202ENST00000373779 FBXO18Q8NFZ0 1043 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 FAM76AQ8TAV0 307 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 CARMIL3Q8ND23 1372 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 C10orf67Q8IYJ2 551 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 PPP2R2CQ9Y2T4 447 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 EBAG9O00559 213 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 GBP2P32456 591 aaPredicted RBP19.62■□□□□ 0.73
PTPRU-202ENST00000373779 CETN2P41208 172 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 CETN1Q12798 172 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 RESTQ13127 1097 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 PPP2R5BQ15173 497 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 ZMYM1Q5SVZ6 1142 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 RRP36Q96EU6 259 aaKnown RBP19.62■□□□□ 0.73
PTPRU-202ENST00000373779 RCOR1Q9UKL0 485 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 FGAP02671 866 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 DMTNQ08495 405 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 KRT79Q5XKE5 535 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 FERMT2Q96AC1 680 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 MAPK8IP1Q9UQF2 711 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 IBSPP21815 317 aaPredicted RBP19.62■□□□□ 0.73
PTPRU-202ENST00000373779 PLCD1P51178 756 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 TBC1D8BQ0IIM8 1120 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 NOSTRINQ8IVI9 506 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 SPATA5Q8NB90 893 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 PPP1R13BQ96KQ4 1090 aa19.62■□□□□ 0.73
PTPRU-202ENST00000373779 TBCAO75347 108 aaKnown RBP19.61■□□□□ 0.73
PTPRU-202ENST00000373779 POTEJP0CG39 1038 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms